Protein–RNA interactions for Protein: P32043

Hoxc5, Homeobox protein Hox-C5, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc5P32043 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Hoxc5P32043 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hoxc5P32043 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hoxc5P32043 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hoxc5P32043 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Hoxc5P32043 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC10.58□□□□□ -0.72
Hoxc5P32043 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hoxc5P32043 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hoxc5P32043 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC10.58□□□□□ -0.72
Hoxc5P32043 Gm37122-201ENSMUST00000195313 1567 ntBASIC10.58□□□□□ -0.72
Hoxc5P32043 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hoxc5P32043 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC10.58□□□□□ -0.72
Hoxc5P32043 Gm11663-201ENSMUST00000117888 290 ntBASIC10.58□□□□□ -0.72
Hoxc5P32043 Gm11783-201ENSMUST00000119549 885 ntBASIC10.58□□□□□ -0.72
Hoxc5P32043 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Hoxc5P32043 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC10.58□□□□□ -0.72
Hoxc5P32043 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
Hoxc5P32043 Cd63-ps-202ENSMUST00000154992 717 ntBASIC10.58□□□□□ -0.72
Hoxc5P32043 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Hoxc5P32043 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC10.58□□□□□ -0.72
Hoxc5P32043 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC10.58□□□□□ -0.72
Hoxc5P32043 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Hoxc5P32043 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hoxc5P32043 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC10.58□□□□□ -0.72
Hoxc5P32043 Gm7293-201ENSMUST00000216682 1007 ntBASIC10.58□□□□□ -0.72
Hoxc5P32043 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Hoxc5P32043 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Hoxc5P32043 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hoxc5P32043 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hoxc5P32043 Gm5537-201ENSMUST00000091117 1252 ntBASIC10.58□□□□□ -0.72
Hoxc5P32043 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hoxc5P32043 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hoxc5P32043 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Hoxc5P32043 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Hoxc5P32043 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Hoxc5P32043 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hoxc5P32043 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hoxc5P32043 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hoxc5P32043 Gm44415-201ENSMUST00000204151 2112 ntBASIC10.58□□□□□ -0.72
Hoxc5P32043 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Hoxc5P32043 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hoxc5P32043 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hoxc5P32043 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hoxc5P32043 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hoxc5P32043 AC153380.1-201ENSMUST00000214959 2364 ntBASIC10.58□□□□□ -0.72
Hoxc5P32043 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
Hoxc5P32043 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hoxc5P32043 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hoxc5P32043 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Hoxc5P32043 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Hoxc5P32043 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hoxc5P32043 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Hoxc5P32043 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC10.57□□□□□ -0.72
Hoxc5P32043 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hoxc5P32043 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hoxc5P32043 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hoxc5P32043 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC10.57□□□□□ -0.72
Hoxc5P32043 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hoxc5P32043 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hoxc5P32043 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Hoxc5P32043 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC10.57□□□□□ -0.72
Hoxc5P32043 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hoxc5P32043 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC10.57□□□□□ -0.72
Hoxc5P32043 Gm11500-201ENSMUST00000118237 601 ntBASIC10.57□□□□□ -0.72
Hoxc5P32043 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC10.57□□□□□ -0.72
Hoxc5P32043 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC10.57□□□□□ -0.72
Hoxc5P32043 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC10.57□□□□□ -0.72
Hoxc5P32043 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Hoxc5P32043 Gm45575-201ENSMUST00000210283 548 ntBASIC10.57□□□□□ -0.72
Hoxc5P32043 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC10.57□□□□□ -0.72
Hoxc5P32043 AC133602.1-201ENSMUST00000227510 509 ntBASIC10.57□□□□□ -0.72
Hoxc5P32043 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Hoxc5P32043 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC10.57□□□□□ -0.72
Hoxc5P32043 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Hoxc5P32043 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Hoxc5P32043 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hoxc5P32043 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Hoxc5P32043 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Hoxc5P32043 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hoxc5P32043 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hoxc5P32043 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Hoxc5P32043 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Hoxc5P32043 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hoxc5P32043 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC10.57□□□□□ -0.72
Hoxc5P32043 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC10.57□□□□□ -0.72
Hoxc5P32043 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hoxc5P32043 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Hoxc5P32043 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hoxc5P32043 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hoxc5P32043 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hoxc5P32043 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hoxc5P32043 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC10.57□□□□□ -0.72
Hoxc5P32043 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC10.56□□□□□ -0.72
Hoxc5P32043 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hoxc5P32043 Adgrv1-214ENSMUST00000224088 1492 ntBASIC10.56□□□□□ -0.72
Hoxc5P32043 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Hoxc5P32043 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Hoxc5P32043 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Hoxc5P32043 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hoxc5P32043 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 106.9 ms