Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Vcam1P29533 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vcam1P29533 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vcam1P29533 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Vcam1P29533 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC13.07□□□□□ -0.32
Vcam1P29533 Gm14005-209ENSMUST00000224993 1832 ntBASIC13.07□□□□□ -0.32
Vcam1P29533 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Vcam1P29533 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Vcam1P29533 Gm6158-201ENSMUST00000109467 904 ntBASIC13.07□□□□□ -0.32
Vcam1P29533 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vcam1P29533 Gm11578-201ENSMUST00000118530 459 ntBASIC13.07□□□□□ -0.32
Vcam1P29533 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC13.07□□□□□ -0.32
Vcam1P29533 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Vcam1P29533 Gm4862-201ENSMUST00000170405 438 ntBASIC13.07□□□□□ -0.32
Vcam1P29533 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vcam1P29533 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Vcam1P29533 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Vcam1P29533 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Vcam1P29533 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Vcam1P29533 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Vcam1P29533 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Vcam1P29533 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Vcam1P29533 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Vcam1P29533 Gm43249-201ENSMUST00000200464 458 ntBASIC13.07□□□□□ -0.32
Vcam1P29533 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC13.07□□□□□ -0.32
Vcam1P29533 Gm45500-201ENSMUST00000211676 803 ntBASIC13.07□□□□□ -0.32
Vcam1P29533 Gm18035-201ENSMUST00000211962 589 ntBASIC13.07□□□□□ -0.32
Vcam1P29533 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Vcam1P29533 AC129975.1-201ENSMUST00000224816 592 ntBASIC13.07□□□□□ -0.32
Vcam1P29533 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vcam1P29533 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vcam1P29533 Gm10020-201ENSMUST00000081993 612 ntBASIC13.07□□□□□ -0.32
Vcam1P29533 Gm5641-201ENSMUST00000091130 1488 ntBASIC13.07□□□□□ -0.32
Vcam1P29533 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Vcam1P29533 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vcam1P29533 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vcam1P29533 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Vcam1P29533 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Vcam1P29533 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Vcam1P29533 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Vcam1P29533 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vcam1P29533 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vcam1P29533 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Vcam1P29533 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vcam1P29533 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vcam1P29533 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vcam1P29533 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vcam1P29533 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13.07□□□□□ -0.32
Vcam1P29533 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vcam1P29533 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Vcam1P29533 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vcam1P29533 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vcam1P29533 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC13.07□□□□□ -0.32
Vcam1P29533 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vcam1P29533 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vcam1P29533 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vcam1P29533 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Vcam1P29533 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Vcam1P29533 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vcam1P29533 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC13.06□□□□□ -0.32
Vcam1P29533 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC13.06□□□□□ -0.32
Vcam1P29533 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vcam1P29533 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC13.06□□□□□ -0.32
Vcam1P29533 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vcam1P29533 Gm14234-201ENSMUST00000119539 845 ntBASIC13.06□□□□□ -0.32
Vcam1P29533 Gm11952-201ENSMUST00000121172 821 ntBASIC13.06□□□□□ -0.32
Vcam1P29533 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Vcam1P29533 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC13.06□□□□□ -0.32
Vcam1P29533 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vcam1P29533 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Vcam1P29533 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Vcam1P29533 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Vcam1P29533 Gm17070-201ENSMUST00000170463 784 ntBASIC13.06□□□□□ -0.32
Vcam1P29533 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Vcam1P29533 Gm24328-201ENSMUST00000175104 67 ntBASIC13.06□□□□□ -0.32
Vcam1P29533 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Vcam1P29533 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC13.06□□□□□ -0.32
Vcam1P29533 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Vcam1P29533 Gm34379-201ENSMUST00000195036 290 ntBASIC13.06□□□□□ -0.32
Vcam1P29533 Gm42430-201ENSMUST00000197209 616 ntBASIC13.06□□□□□ -0.32
Vcam1P29533 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC13.06□□□□□ -0.32
Vcam1P29533 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Vcam1P29533 CT030166.5-201ENSMUST00000222249 420 ntBASIC13.06□□□□□ -0.32
Vcam1P29533 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC13.06□□□□□ -0.32
Vcam1P29533 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Vcam1P29533 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vcam1P29533 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Vcam1P29533 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Vcam1P29533 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vcam1P29533 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC13.06□□□□□ -0.32
Vcam1P29533 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC13.06□□□□□ -0.32
Vcam1P29533 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Vcam1P29533 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Vcam1P29533 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Vcam1P29533 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vcam1P29533 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vcam1P29533 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Vcam1P29533 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC13.05□□□□□ -0.32
Vcam1P29533 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vcam1P29533 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 115.6 ms