Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Gm42682-201ENSMUST00000198349 1265 ntBASIC10.6□□□□□ -0.71
Cd40lgP27548 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Cd40lgP27548 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Cd40lgP27548 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cd40lgP27548 AC131330.1-201ENSMUST00000227814 1015 ntBASIC10.6□□□□□ -0.71
Cd40lgP27548 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cd40lgP27548 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cd40lgP27548 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cd40lgP27548 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC10.6□□□□□ -0.71
Cd40lgP27548 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cd40lgP27548 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cd40lgP27548 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cd40lgP27548 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Cd40lgP27548 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cd40lgP27548 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cd40lgP27548 Pcdhga1-201ENSMUST00000194190 4692 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cd40lgP27548 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC10.6□□□□□ -0.71
Cd40lgP27548 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Cd40lgP27548 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Cd40lgP27548 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cd40lgP27548 Hivep2-204ENSMUST00000187083 9268 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cd40lgP27548 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cd40lgP27548 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cd40lgP27548 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cd40lgP27548 Zdbf2-201ENSMUST00000029025 12112 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cd40lgP27548 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Cd40lgP27548 Gm43267-201ENSMUST00000199664 1796 ntBASIC10.6□□□□□ -0.71
Cd40lgP27548 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cd40lgP27548 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Cd40lgP27548 Chst15-202ENSMUST00000080215 4813 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cd40lgP27548 Spen-202ENSMUST00000105786 12299 ntAPPRIS P3 TSL 5 BASIC10.59□□□□□ -0.71
Cd40lgP27548 Scn8a-201ENSMUST00000082209 11293 ntAPPRIS ALT1 TSL 5 BASIC10.59□□□□□ -0.71
Cd40lgP27548 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cd40lgP27548 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Cd40lgP27548 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cd40lgP27548 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cd40lgP27548 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC10.59□□□□□ -0.71
Cd40lgP27548 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cd40lgP27548 Gm7851-201ENSMUST00000117574 323 ntBASIC10.59□□□□□ -0.71
Cd40lgP27548 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC10.59□□□□□ -0.71
Cd40lgP27548 Gm13461-201ENSMUST00000120980 662 ntBASIC10.59□□□□□ -0.71
Cd40lgP27548 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cd40lgP27548 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Cd40lgP27548 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC10.59□□□□□ -0.71
Cd40lgP27548 Gm29499-201ENSMUST00000189151 486 ntBASIC10.59□□□□□ -0.71
Cd40lgP27548 Gm5733-201ENSMUST00000190232 939 ntBASIC10.59□□□□□ -0.71
Cd40lgP27548 Gm28329-201ENSMUST00000191208 689 ntBASIC10.59□□□□□ -0.71
Cd40lgP27548 Gm29171-201ENSMUST00000191397 486 ntBASIC10.59□□□□□ -0.71
Cd40lgP27548 Gm37246-201ENSMUST00000192665 835 ntBASIC10.59□□□□□ -0.71
Cd40lgP27548 Gm38117-201ENSMUST00000194653 939 ntBASIC10.59□□□□□ -0.71
Cd40lgP27548 Gm6450-201ENSMUST00000200896 574 ntBASIC10.59□□□□□ -0.71
Cd40lgP27548 Gm35960-201ENSMUST00000202712 767 ntBASIC10.59□□□□□ -0.71
Cd40lgP27548 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cd40lgP27548 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cd40lgP27548 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cd40lgP27548 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cd40lgP27548 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Cd40lgP27548 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Cd40lgP27548 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cd40lgP27548 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cd40lgP27548 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cd40lgP27548 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cd40lgP27548 Epb41l5-202ENSMUST00000052404 6442 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Cd40lgP27548 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cd40lgP27548 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cd40lgP27548 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cd40lgP27548 Gm42141-201ENSMUST00000196534 2172 ntBASIC10.59□□□□□ -0.71
Cd40lgP27548 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Cd40lgP27548 Nwd1-201ENSMUST00000093427 7840 ntTSL 5 BASIC10.59□□□□□ -0.71
Cd40lgP27548 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Cd40lgP27548 Gm37613-201ENSMUST00000195677 3580 ntBASIC10.59□□□□□ -0.71
Cd40lgP27548 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cd40lgP27548 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Cd40lgP27548 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC10.58□□□□□ -0.71
Cd40lgP27548 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.71
Cd40lgP27548 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cd40lgP27548 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cd40lgP27548 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cd40lgP27548 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Cd40lgP27548 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cd40lgP27548 Gm37580-201ENSMUST00000192408 2800 ntBASIC10.58□□□□□ -0.72
Cd40lgP27548 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cd40lgP27548 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Cd40lgP27548 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cd40lgP27548 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Cd40lgP27548 Gm44831-201ENSMUST00000208469 2989 ntBASIC10.58□□□□□ -0.72
Cd40lgP27548 Dopey2-201ENSMUST00000045004 7319 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cd40lgP27548 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cd40lgP27548 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC10.58□□□□□ -0.72
Cd40lgP27548 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC10.58□□□□□ -0.72
Cd40lgP27548 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cd40lgP27548 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cd40lgP27548 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cd40lgP27548 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cd40lgP27548 Atad5-201ENSMUST00000017694 7272 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cd40lgP27548 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cd40lgP27548 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Cd40lgP27548 Gm13916-201ENSMUST00000117368 628 ntBASIC10.58□□□□□ -0.72
Cd40lgP27548 Gm13809-201ENSMUST00000117921 597 ntBASIC10.58□□□□□ -0.72
Cd40lgP27548 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms