Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nfkb1P25799 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Nfkb1P25799 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nfkb1P25799 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nfkb1P25799 Gm6754-201ENSMUST00000117124 913 ntBASIC11.77□□□□□ -0.53
Nfkb1P25799 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC11.77□□□□□ -0.53
Nfkb1P25799 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC11.77□□□□□ -0.53
Nfkb1P25799 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC11.77□□□□□ -0.53
Nfkb1P25799 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Nfkb1P25799 Gm29155-201ENSMUST00000185910 269 ntBASIC11.77□□□□□ -0.53
Nfkb1P25799 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Nfkb1P25799 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC11.77□□□□□ -0.53
Nfkb1P25799 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nfkb1P25799 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Nfkb1P25799 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC11.77□□□□□ -0.53
Nfkb1P25799 CT030170.2-201ENSMUST00000223267 126 ntBASIC11.77□□□□□ -0.53
Nfkb1P25799 Gm5468-202ENSMUST00000227851 682 ntBASIC11.77□□□□□ -0.53
Nfkb1P25799 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nfkb1P25799 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Nfkb1P25799 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nfkb1P25799 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
Nfkb1P25799 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nfkb1P25799 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
Nfkb1P25799 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nfkb1P25799 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nfkb1P25799 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nfkb1P25799 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nfkb1P25799 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Nfkb1P25799 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Nfkb1P25799 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nfkb1P25799 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nfkb1P25799 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Nfkb1P25799 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC11.77□□□□□ -0.53
Nfkb1P25799 Gm44190-201ENSMUST00000205083 1401 ntBASIC11.77□□□□□ -0.53
Nfkb1P25799 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nfkb1P25799 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nfkb1P25799 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nfkb1P25799 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
Nfkb1P25799 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nfkb1P25799 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nfkb1P25799 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nfkb1P25799 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nfkb1P25799 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nfkb1P25799 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nfkb1P25799 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Nfkb1P25799 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nfkb1P25799 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nfkb1P25799 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Nfkb1P25799 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nfkb1P25799 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nfkb1P25799 Gm4294-201ENSMUST00000105169 614 ntBASIC11.76□□□□□ -0.53
Nfkb1P25799 Gm14395-201ENSMUST00000120494 563 ntBASIC11.76□□□□□ -0.53
Nfkb1P25799 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC11.76□□□□□ -0.53
Nfkb1P25799 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nfkb1P25799 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC11.76□□□□□ -0.53
Nfkb1P25799 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nfkb1P25799 Gm25492-201ENSMUST00000157383 129 ntBASIC11.76□□□□□ -0.53
Nfkb1P25799 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11.76□□□□□ -0.53
Nfkb1P25799 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nfkb1P25799 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nfkb1P25799 Mir6407-201ENSMUST00000184510 101 ntBASIC11.76□□□□□ -0.53
Nfkb1P25799 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC11.76□□□□□ -0.53
Nfkb1P25799 Gm5100-201ENSMUST00000195631 589 ntBASIC11.76□□□□□ -0.53
Nfkb1P25799 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC11.76□□□□□ -0.53
Nfkb1P25799 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC11.76□□□□□ -0.53
Nfkb1P25799 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC11.76□□□□□ -0.53
Nfkb1P25799 Gm43930-201ENSMUST00000203868 845 ntBASIC11.76□□□□□ -0.53
Nfkb1P25799 Gm3793-201ENSMUST00000204973 672 ntBASIC11.76□□□□□ -0.53
Nfkb1P25799 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC11.76□□□□□ -0.53
Nfkb1P25799 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC11.76□□□□□ -0.53
Nfkb1P25799 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC11.76□□□□□ -0.53
Nfkb1P25799 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC11.76□□□□□ -0.53
Nfkb1P25799 Gm6722-201ENSMUST00000221586 390 ntBASIC11.76□□□□□ -0.53
Nfkb1P25799 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nfkb1P25799 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Nfkb1P25799 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC11.76□□□□□ -0.53
Nfkb1P25799 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nfkb1P25799 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nfkb1P25799 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nfkb1P25799 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nfkb1P25799 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nfkb1P25799 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nfkb1P25799 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nfkb1P25799 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.76□□□□□ -0.53
Nfkb1P25799 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nfkb1P25799 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nfkb1P25799 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.76□□□□□ -0.53
Nfkb1P25799 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Nfkb1P25799 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nfkb1P25799 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nfkb1P25799 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nfkb1P25799 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nfkb1P25799 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Nfkb1P25799 Gm43172-201ENSMUST00000202139 2137 ntBASIC11.75□□□□□ -0.53
Nfkb1P25799 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.75□□□□□ -0.53
Nfkb1P25799 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nfkb1P25799 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.75□□□□□ -0.53
Nfkb1P25799 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nfkb1P25799 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nfkb1P25799 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms