Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pde6bP23440 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pde6bP23440 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pde6bP23440 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pde6bP23440 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.55□□□□□ -0.4
Pde6bP23440 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pde6bP23440 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Pde6bP23440 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.55□□□□□ -0.4
Pde6bP23440 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pde6bP23440 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Pde6bP23440 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pde6bP23440 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pde6bP23440 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pde6bP23440 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pde6bP23440 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pde6bP23440 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pde6bP23440 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pde6bP23440 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pde6bP23440 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pde6bP23440 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Pde6bP23440 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pde6bP23440 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.54□□□□□ -0.4
Pde6bP23440 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Pde6bP23440 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pde6bP23440 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pde6bP23440 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pde6bP23440 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pde6bP23440 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC12.54□□□□□ -0.4
Pde6bP23440 Gm25063-201ENSMUST00000104666 94 ntBASIC12.54□□□□□ -0.4
Pde6bP23440 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pde6bP23440 Gm6771-201ENSMUST00000182716 1001 ntBASIC12.54□□□□□ -0.4
Pde6bP23440 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC12.54□□□□□ -0.4
Pde6bP23440 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pde6bP23440 Gm5982-201ENSMUST00000196234 512 ntBASIC12.54□□□□□ -0.4
Pde6bP23440 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pde6bP23440 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC12.54□□□□□ -0.4
Pde6bP23440 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pde6bP23440 AC118639.2-201ENSMUST00000226289 223 ntBASIC12.54□□□□□ -0.4
Pde6bP23440 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Pde6bP23440 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Pde6bP23440 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.54□□□□□ -0.4
Pde6bP23440 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pde6bP23440 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pde6bP23440 Gm6655-201ENSMUST00000201932 1309 ntBASIC12.54□□□□□ -0.4
Pde6bP23440 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Pde6bP23440 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pde6bP23440 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pde6bP23440 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
Pde6bP23440 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pde6bP23440 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pde6bP23440 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Pde6bP23440 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pde6bP23440 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Pde6bP23440 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.54□□□□□ -0.4
Pde6bP23440 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pde6bP23440 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pde6bP23440 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pde6bP23440 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Pde6bP23440 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pde6bP23440 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Pde6bP23440 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pde6bP23440 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pde6bP23440 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pde6bP23440 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pde6bP23440 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pde6bP23440 Gm26684-202ENSMUST00000228229 8257 ntBASIC12.53□□□□□ -0.4
Pde6bP23440 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pde6bP23440 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pde6bP23440 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pde6bP23440 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pde6bP23440 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Pde6bP23440 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pde6bP23440 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC12.53□□□□□ -0.4
Pde6bP23440 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pde6bP23440 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pde6bP23440 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pde6bP23440 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pde6bP23440 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pde6bP23440 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Pde6bP23440 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pde6bP23440 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pde6bP23440 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC12.53□□□□□ -0.4
Pde6bP23440 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pde6bP23440 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC12.53□□□□□ -0.4
Pde6bP23440 Gm15744-201ENSMUST00000161734 213 ntBASIC12.53□□□□□ -0.4
Pde6bP23440 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pde6bP23440 Gm26134-201ENSMUST00000178484 110 ntBASIC12.53□□□□□ -0.4
Pde6bP23440 Gm27390-201ENSMUST00000184516 176 ntBASIC12.53□□□□□ -0.4
Pde6bP23440 Mir8093-201ENSMUST00000185043 137 ntBASIC12.53□□□□□ -0.4
Pde6bP23440 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC12.53□□□□□ -0.4
Pde6bP23440 Gm5100-201ENSMUST00000195631 589 ntBASIC12.53□□□□□ -0.4
Pde6bP23440 Gm45120-201ENSMUST00000208880 408 ntBASIC12.53□□□□□ -0.4
Pde6bP23440 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Pde6bP23440 AC154184.3-201ENSMUST00000225620 1090 ntBASIC12.53□□□□□ -0.4
Pde6bP23440 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pde6bP23440 Gm23105-201ENSMUST00000083719 134 ntBASIC12.53□□□□□ -0.4
Pde6bP23440 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pde6bP23440 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pde6bP23440 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Pde6bP23440 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms