Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Clk1P22518 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Clk1P22518 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Clk1P22518 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Clk1P22518 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Clk1P22518 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Clk1P22518 Marveld2-201ENSMUST00000022137 3061 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Clk1P22518 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Clk1P22518 Gm44597-202ENSMUST00000203287 3516 ntTSL 2 BASIC10.77□□□□□ -0.69
Clk1P22518 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Clk1P22518 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Clk1P22518 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Clk1P22518 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Clk1P22518 Dlgap2-208ENSMUST00000150247 3138 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Clk1P22518 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC10.77□□□□□ -0.69
Clk1P22518 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Clk1P22518 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Clk1P22518 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Clk1P22518 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Clk1P22518 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Clk1P22518 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Clk1P22518 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Clk1P22518 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC10.76□□□□□ -0.69
Clk1P22518 Entpd5-206ENSMUST00000122194 2145 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Clk1P22518 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Clk1P22518 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Clk1P22518 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Clk1P22518 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Clk1P22518 Cd1d1-201ENSMUST00000029717 1946 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Clk1P22518 Cd2bp2-203ENSMUST00000205316 2912 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Clk1P22518 Agpat3-204ENSMUST00000105389 3678 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Clk1P22518 Map4-204ENSMUST00000164930 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Clk1P22518 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Clk1P22518 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Clk1P22518 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Clk1P22518 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Clk1P22518 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Clk1P22518 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Clk1P22518 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Clk1P22518 Gm37348-201ENSMUST00000193104 1789 ntBASIC10.76□□□□□ -0.69
Clk1P22518 Gm43807-201ENSMUST00000200678 1781 ntBASIC10.76□□□□□ -0.69
Clk1P22518 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Clk1P22518 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Clk1P22518 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC10.76□□□□□ -0.69
Clk1P22518 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Clk1P22518 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
Clk1P22518 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Clk1P22518 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC10.76□□□□□ -0.69
Clk1P22518 Gm26047-201ENSMUST00000157308 113 ntBASIC10.76□□□□□ -0.69
Clk1P22518 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Clk1P22518 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Clk1P22518 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Clk1P22518 Gm26047-202ENSMUST00000198840 115 ntBASIC10.76□□□□□ -0.69
Clk1P22518 Gm45224-201ENSMUST00000208203 414 ntBASIC10.76□□□□□ -0.69
Clk1P22518 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Clk1P22518 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC10.76□□□□□ -0.69
Clk1P22518 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC10.76□□□□□ -0.69
Clk1P22518 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Clk1P22518 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Clk1P22518 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Clk1P22518 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Clk1P22518 Ctc1-202ENSMUST00000116359 3978 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Clk1P22518 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC10.76□□□□□ -0.69
Clk1P22518 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Clk1P22518 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Clk1P22518 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Clk1P22518 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Clk1P22518 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Clk1P22518 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC10.76□□□□□ -0.69
Clk1P22518 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Clk1P22518 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Clk1P22518 Gm5592-201ENSMUST00000097044 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Clk1P22518 Gm29100-201ENSMUST00000187564 4410 ntBASIC10.76□□□□□ -0.69
Clk1P22518 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Clk1P22518 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Clk1P22518 Gm36908-201ENSMUST00000218080 1662 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Clk1P22518 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Clk1P22518 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Clk1P22518 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Clk1P22518 Gm11131-201ENSMUST00000113886 3122 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Clk1P22518 Gm29245-201ENSMUST00000187332 1416 ntBASIC10.75□□□□□ -0.69
Clk1P22518 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Clk1P22518 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Clk1P22518 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Clk1P22518 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Clk1P22518 Ints6l-201ENSMUST00000039374 3766 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Clk1P22518 Ppil2-201ENSMUST00000023455 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Clk1P22518 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Clk1P22518 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Clk1P22518 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Clk1P22518 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Clk1P22518 Tesk2-202ENSMUST00000106456 2430 ntTSL 5 BASIC10.75□□□□□ -0.69
Clk1P22518 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Clk1P22518 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Clk1P22518 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Clk1P22518 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Clk1P22518 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Clk1P22518 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Clk1P22518 Sorbs1-201ENSMUST00000099466 2223 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Clk1P22518 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms