Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC9.68□□□□□ -0.86
Tnfrsf9P20334 Gm28635-201ENSMUST00000189772 4734 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Tnfrsf9P20334 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Tnfrsf9P20334 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC9.68□□□□□ -0.86
Tnfrsf9P20334 Ntrk3-206ENSMUST00000195262 2774 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Tnfrsf9P20334 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Tnfrsf9P20334 AC158777.1-201ENSMUST00000226216 1724 ntBASIC9.68□□□□□ -0.86
Tnfrsf9P20334 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Tnfrsf9P20334 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tnfrsf9P20334 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tnfrsf9P20334 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Tnfrsf9P20334 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tnfrsf9P20334 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC9.67□□□□□ -0.86
Tnfrsf9P20334 Casp4-201ENSMUST00000027012 1435 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tnfrsf9P20334 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tnfrsf9P20334 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tnfrsf9P20334 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Tnfrsf9P20334 Gm28403-201ENSMUST00000188743 2710 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Tnfrsf9P20334 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tnfrsf9P20334 Gm5799-201ENSMUST00000169023 1314 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Tnfrsf9P20334 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tnfrsf9P20334 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tnfrsf9P20334 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC9.67□□□□□ -0.86
Tnfrsf9P20334 Gm43522-201ENSMUST00000196697 1922 ntBASIC9.67□□□□□ -0.86
Tnfrsf9P20334 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC9.67□□□□□ -0.86
Tnfrsf9P20334 Hspb11-202ENSMUST00000106749 607 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tnfrsf9P20334 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Tnfrsf9P20334 Casp8ap2-202ENSMUST00000108178 1189 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Tnfrsf9P20334 Gm13035-201ENSMUST00000117496 342 ntBASIC9.67□□□□□ -0.86
Tnfrsf9P20334 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tnfrsf9P20334 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Tnfrsf9P20334 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC9.67□□□□□ -0.86
Tnfrsf9P20334 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC9.67□□□□□ -0.86
Tnfrsf9P20334 AU040972-201ENSMUST00000165610 1042 ntTSL 3 BASIC9.67□□□□□ -0.86
Tnfrsf9P20334 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC9.67□□□□□ -0.86
Tnfrsf9P20334 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Tnfrsf9P20334 Gm38393-201ENSMUST00000179360 1199 ntAPPRIS P5 TSL 5 BASIC9.67□□□□□ -0.86
Tnfrsf9P20334 Gm29155-201ENSMUST00000185910 269 ntBASIC9.67□□□□□ -0.86
Tnfrsf9P20334 Eloc-206ENSMUST00000186948 641 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
Tnfrsf9P20334 Gm10925-201ENSMUST00000189941 678 ntBASIC9.67□□□□□ -0.86
Tnfrsf9P20334 Gm38210-201ENSMUST00000191944 809 ntBASIC9.67□□□□□ -0.86
Tnfrsf9P20334 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC9.67□□□□□ -0.86
Tnfrsf9P20334 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC9.67□□□□□ -0.86
Tnfrsf9P20334 Gm42836-201ENSMUST00000197198 728 ntTSL 5 BASIC9.67□□□□□ -0.86
Tnfrsf9P20334 AC124457.1-201ENSMUST00000198845 120 ntBASIC9.67□□□□□ -0.86
Tnfrsf9P20334 Gm44200-201ENSMUST00000204883 662 ntTSL 5 BASIC9.67□□□□□ -0.86
Tnfrsf9P20334 Gm43916-201ENSMUST00000205062 967 ntBASIC9.67□□□□□ -0.86
Tnfrsf9P20334 Gm19187-201ENSMUST00000206781 892 ntBASIC9.67□□□□□ -0.86
Tnfrsf9P20334 Gm44554-201ENSMUST00000208738 147 ntBASIC9.67□□□□□ -0.86
Tnfrsf9P20334 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC9.67□□□□□ -0.86
Tnfrsf9P20334 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tnfrsf9P20334 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC9.67□□□□□ -0.86
Tnfrsf9P20334 AC174797.2-202ENSMUST00000225729 568 ntBASIC9.67□□□□□ -0.86
Tnfrsf9P20334 AC125209.1-201ENSMUST00000225812 766 ntBASIC9.67□□□□□ -0.86
Tnfrsf9P20334 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC9.67□□□□□ -0.86
Tnfrsf9P20334 Olfr1260-201ENSMUST00000061830 933 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Tnfrsf9P20334 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Tnfrsf9P20334 Tpbpb-201ENSMUST00000080766 850 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tnfrsf9P20334 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Tnfrsf9P20334 Mir339-201ENSMUST00000083659 96 ntBASIC9.67□□□□□ -0.86
Tnfrsf9P20334 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Tnfrsf9P20334 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tnfrsf9P20334 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tnfrsf9P20334 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tnfrsf9P20334 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC9.67□□□□□ -0.86
Tnfrsf9P20334 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tnfrsf9P20334 Qars-201ENSMUST00000006838 2800 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tnfrsf9P20334 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Tnfrsf9P20334 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Tnfrsf9P20334 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tnfrsf9P20334 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tnfrsf9P20334 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tnfrsf9P20334 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC9.67□□□□□ -0.86
Tnfrsf9P20334 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tnfrsf9P20334 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tnfrsf9P20334 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tnfrsf9P20334 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tnfrsf9P20334 Apobec4-201ENSMUST00000068875 1566 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tnfrsf9P20334 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Tnfrsf9P20334 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Tnfrsf9P20334 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Tnfrsf9P20334 Gm45089-201ENSMUST00000208082 2040 ntBASIC9.66□□□□□ -0.86
Tnfrsf9P20334 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Tnfrsf9P20334 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Tnfrsf9P20334 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Tnfrsf9P20334 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Tnfrsf9P20334 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Tnfrsf9P20334 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Tnfrsf9P20334 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Tnfrsf9P20334 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Tnfrsf9P20334 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Tnfrsf9P20334 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Tnfrsf9P20334 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Tnfrsf9P20334 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC9.66□□□□□ -0.86
Tnfrsf9P20334 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Tnfrsf9P20334 Npas4-201ENSMUST00000056129 3277 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Tnfrsf9P20334 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Tnfrsf9P20334 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Tnfrsf9P20334 Ilf3-208ENSMUST00000214758 3177 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Tnfrsf9P20334 Rrp8-202ENSMUST00000098148 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms