Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Gm43931-201ENSMUST00000204817 2870 ntBASIC11.62□□□□□ -0.55
PdgfrbP05622 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC11.62□□□□□ -0.55
PdgfrbP05622 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC11.62□□□□□ -0.55
PdgfrbP05622 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
PdgfrbP05622 Gm6580-201ENSMUST00000117504 1357 ntBASIC11.62□□□□□ -0.55
PdgfrbP05622 Gm7964-201ENSMUST00000051522 1378 ntBASIC11.62□□□□□ -0.55
PdgfrbP05622 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC11.62□□□□□ -0.55
PdgfrbP05622 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
PdgfrbP05622 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
PdgfrbP05622 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
PdgfrbP05622 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
PdgfrbP05622 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
PdgfrbP05622 AC154537.1-201ENSMUST00000226101 1304 ntBASIC11.61□□□□□ -0.55
PdgfrbP05622 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC11.61□□□□□ -0.55
PdgfrbP05622 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
PdgfrbP05622 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
PdgfrbP05622 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
PdgfrbP05622 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
PdgfrbP05622 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
PdgfrbP05622 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
PdgfrbP05622 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
PdgfrbP05622 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC11.61□□□□□ -0.55
PdgfrbP05622 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
PdgfrbP05622 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
PdgfrbP05622 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
PdgfrbP05622 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
PdgfrbP05622 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
PdgfrbP05622 Gm24541-201ENSMUST00000103871 96 ntBASIC11.61□□□□□ -0.55
PdgfrbP05622 Gm12467-201ENSMUST00000117625 745 ntBASIC11.61□□□□□ -0.55
PdgfrbP05622 Gm11893-201ENSMUST00000117829 491 ntBASIC11.61□□□□□ -0.55
PdgfrbP05622 Gm7150-201ENSMUST00000122032 981 ntBASIC11.61□□□□□ -0.55
PdgfrbP05622 AV099323-201ENSMUST00000124336 921 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
PdgfrbP05622 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
PdgfrbP05622 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC11.61□□□□□ -0.55
PdgfrbP05622 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC11.61□□□□□ -0.55
PdgfrbP05622 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
PdgfrbP05622 Gm3329-201ENSMUST00000159873 556 ntBASIC11.61□□□□□ -0.55
PdgfrbP05622 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
PdgfrbP05622 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
PdgfrbP05622 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC11.61□□□□□ -0.55
PdgfrbP05622 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
PdgfrbP05622 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC11.61□□□□□ -0.55
PdgfrbP05622 Gm29499-201ENSMUST00000189151 486 ntBASIC11.61□□□□□ -0.55
PdgfrbP05622 Gm28329-201ENSMUST00000191208 689 ntBASIC11.61□□□□□ -0.55
PdgfrbP05622 Gm29171-201ENSMUST00000191397 486 ntBASIC11.61□□□□□ -0.55
PdgfrbP05622 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
PdgfrbP05622 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
PdgfrbP05622 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
PdgfrbP05622 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
PdgfrbP05622 Gm1821-202ENSMUST00000227415 750 ntBASIC11.61□□□□□ -0.55
PdgfrbP05622 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
PdgfrbP05622 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
PdgfrbP05622 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
PdgfrbP05622 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
PdgfrbP05622 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC11.61□□□□□ -0.55
PdgfrbP05622 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
PdgfrbP05622 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
PdgfrbP05622 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
PdgfrbP05622 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
PdgfrbP05622 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
PdgfrbP05622 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
PdgfrbP05622 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
PdgfrbP05622 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
PdgfrbP05622 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
PdgfrbP05622 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
PdgfrbP05622 Gm43127-201ENSMUST00000195890 2789 ntBASIC11.61□□□□□ -0.55
PdgfrbP05622 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
PdgfrbP05622 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
PdgfrbP05622 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
PdgfrbP05622 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
PdgfrbP05622 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
PdgfrbP05622 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
PdgfrbP05622 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
PdgfrbP05622 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
PdgfrbP05622 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
PdgfrbP05622 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
PdgfrbP05622 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
PdgfrbP05622 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
PdgfrbP05622 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
PdgfrbP05622 Gm14150-201ENSMUST00000122404 1354 ntBASIC11.6□□□□□ -0.55
PdgfrbP05622 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
PdgfrbP05622 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
PdgfrbP05622 Gm11941-201ENSMUST00000119904 610 ntBASIC11.6□□□□□ -0.55
PdgfrbP05622 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC11.6□□□□□ -0.55
PdgfrbP05622 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC11.6□□□□□ -0.55
PdgfrbP05622 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
PdgfrbP05622 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
PdgfrbP05622 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC11.6□□□□□ -0.55
PdgfrbP05622 Gm6397-201ENSMUST00000161973 1069 ntBASIC11.6□□□□□ -0.55
PdgfrbP05622 Gm3150-201ENSMUST00000166418 204 ntBASIC11.6□□□□□ -0.55
PdgfrbP05622 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
PdgfrbP05622 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC11.6□□□□□ -0.55
PdgfrbP05622 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
PdgfrbP05622 Gm43966-201ENSMUST00000203301 612 ntBASIC11.6□□□□□ -0.55
PdgfrbP05622 Gm6905-201ENSMUST00000205729 511 ntBASIC11.6□□□□□ -0.55
PdgfrbP05622 Gm19189-201ENSMUST00000221689 754 ntBASIC11.6□□□□□ -0.55
PdgfrbP05622 Prl7a1-203ENSMUST00000224852 1283 ntBASIC11.6□□□□□ -0.55
PdgfrbP05622 Rpp30-201ENSMUST00000025714 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
PdgfrbP05622 Prl7a1-201ENSMUST00000006659 940 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
PdgfrbP05622 Gm7551-201ENSMUST00000089593 1074 ntBASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms