Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rnf13O54965 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rnf13O54965 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rnf13O54965 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rnf13O54965 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rnf13O54965 CT010447.1-201ENSMUST00000225657 1608 ntBASIC10.33□□□□□ -0.76
Rnf13O54965 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC10.33□□□□□ -0.76
Rnf13O54965 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Rnf13O54965 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC10.33□□□□□ -0.76
Rnf13O54965 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Rnf13O54965 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Rnf13O54965 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rnf13O54965 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC10.33□□□□□ -0.76
Rnf13O54965 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rnf13O54965 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rnf13O54965 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Rnf13O54965 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rnf13O54965 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Rnf13O54965 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Rnf13O54965 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rnf13O54965 Gm13392-201ENSMUST00000117708 150 ntBASIC10.33□□□□□ -0.76
Rnf13O54965 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rnf13O54965 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Rnf13O54965 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rnf13O54965 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
Rnf13O54965 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC10.33□□□□□ -0.76
Rnf13O54965 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Rnf13O54965 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Rnf13O54965 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC10.33□□□□□ -0.76
Rnf13O54965 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC10.33□□□□□ -0.76
Rnf13O54965 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC10.33□□□□□ -0.76
Rnf13O54965 Gm8885-201ENSMUST00000189382 598 ntBASIC10.33□□□□□ -0.76
Rnf13O54965 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC10.33□□□□□ -0.76
Rnf13O54965 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC10.33□□□□□ -0.76
Rnf13O54965 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC10.33□□□□□ -0.76
Rnf13O54965 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC10.33□□□□□ -0.76
Rnf13O54965 Gm21769-201ENSMUST00000211922 111 ntBASIC10.33□□□□□ -0.76
Rnf13O54965 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC10.33□□□□□ -0.76
Rnf13O54965 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC10.33□□□□□ -0.76
Rnf13O54965 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rnf13O54965 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rnf13O54965 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rnf13O54965 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Rnf13O54965 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rnf13O54965 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC10.33□□□□□ -0.76
Rnf13O54965 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rnf13O54965 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
Rnf13O54965 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Rnf13O54965 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Rnf13O54965 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC10.33□□□□□ -0.76
Rnf13O54965 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Rnf13O54965 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Rnf13O54965 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rnf13O54965 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Rnf13O54965 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rnf13O54965 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rnf13O54965 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rnf13O54965 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rnf13O54965 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Rnf13O54965 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rnf13O54965 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Rnf13O54965 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Rnf13O54965 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Rnf13O54965 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC10.33□□□□□ -0.76
Rnf13O54965 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC10.32□□□□□ -0.76
Rnf13O54965 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rnf13O54965 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rnf13O54965 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Rnf13O54965 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rnf13O54965 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rnf13O54965 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rnf13O54965 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rnf13O54965 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rnf13O54965 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rnf13O54965 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Rnf13O54965 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Rnf13O54965 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rnf13O54965 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC10.32□□□□□ -0.76
Rnf13O54965 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Rnf13O54965 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rnf13O54965 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC10.32□□□□□ -0.76
Rnf13O54965 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rnf13O54965 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC10.32□□□□□ -0.76
Rnf13O54965 Gm5940-201ENSMUST00000117582 1068 ntBASIC10.32□□□□□ -0.76
Rnf13O54965 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC10.32□□□□□ -0.76
Rnf13O54965 Gm27516-201ENSMUST00000184237 98 ntBASIC10.32□□□□□ -0.76
Rnf13O54965 Gm38117-201ENSMUST00000194653 939 ntBASIC10.32□□□□□ -0.76
Rnf13O54965 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC10.32□□□□□ -0.76
Rnf13O54965 Gm42629-201ENSMUST00000199063 1102 ntBASIC10.32□□□□□ -0.76
Rnf13O54965 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Rnf13O54965 AC102569.1-201ENSMUST00000221563 685 ntBASIC10.32□□□□□ -0.76
Rnf13O54965 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rnf13O54965 Gm7399-201ENSMUST00000032395 858 ntBASIC10.32□□□□□ -0.76
Rnf13O54965 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rnf13O54965 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rnf13O54965 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rnf13O54965 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Rnf13O54965 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Rnf13O54965 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rnf13O54965 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms