Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Srp54bE9PXC0 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.31□□□□□ -0.6
Srp54bE9PXC0 Gm37284-201ENSMUST00000193607 539 ntBASIC11.31□□□□□ -0.6
Srp54bE9PXC0 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC11.31□□□□□ -0.6
Srp54bE9PXC0 Gm45120-201ENSMUST00000208880 408 ntBASIC11.31□□□□□ -0.6
Srp54bE9PXC0 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC11.31□□□□□ -0.6
Srp54bE9PXC0 Gm3619-201ENSMUST00000219947 775 ntBASIC11.31□□□□□ -0.6
Srp54bE9PXC0 AC174797.2-202ENSMUST00000225729 568 ntBASIC11.31□□□□□ -0.6
Srp54bE9PXC0 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Srp54bE9PXC0 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Srp54bE9PXC0 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Srp54bE9PXC0 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Srp54bE9PXC0 Gm10263-201ENSMUST00000085163 300 ntBASIC11.31□□□□□ -0.6
Srp54bE9PXC0 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Srp54bE9PXC0 Gm44190-201ENSMUST00000205083 1401 ntBASIC11.31□□□□□ -0.6
Srp54bE9PXC0 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Srp54bE9PXC0 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC11.31□□□□□ -0.6
Srp54bE9PXC0 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Srp54bE9PXC0 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.31□□□□□ -0.6
Srp54bE9PXC0 Gm10548-201ENSMUST00000097631 2629 ntBASIC11.31□□□□□ -0.6
Srp54bE9PXC0 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Srp54bE9PXC0 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Srp54bE9PXC0 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Srp54bE9PXC0 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Srp54bE9PXC0 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Srp54bE9PXC0 Gm43242-201ENSMUST00000199507 1776 ntBASIC11.31□□□□□ -0.6
Srp54bE9PXC0 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Srp54bE9PXC0 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Srp54bE9PXC0 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Srp54bE9PXC0 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Srp54bE9PXC0 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC11.3□□□□□ -0.6
Srp54bE9PXC0 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Srp54bE9PXC0 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Srp54bE9PXC0 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Srp54bE9PXC0 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Srp54bE9PXC0 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Srp54bE9PXC0 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Srp54bE9PXC0 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Srp54bE9PXC0 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Srp54bE9PXC0 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Srp54bE9PXC0 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC11.3□□□□□ -0.6
Srp54bE9PXC0 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Srp54bE9PXC0 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Srp54bE9PXC0 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Srp54bE9PXC0 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Srp54bE9PXC0 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Srp54bE9PXC0 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Srp54bE9PXC0 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Srp54bE9PXC0 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Srp54bE9PXC0 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Srp54bE9PXC0 Selenot-ps-201ENSMUST00000119098 593 ntBASIC11.3□□□□□ -0.6
Srp54bE9PXC0 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC11.3□□□□□ -0.6
Srp54bE9PXC0 Gm25492-201ENSMUST00000157383 129 ntBASIC11.3□□□□□ -0.6
Srp54bE9PXC0 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC11.3□□□□□ -0.6
Srp54bE9PXC0 Gm6771-201ENSMUST00000182716 1001 ntBASIC11.3□□□□□ -0.6
Srp54bE9PXC0 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Srp54bE9PXC0 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC11.3□□□□□ -0.6
Srp54bE9PXC0 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
Srp54bE9PXC0 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC11.3□□□□□ -0.6
Srp54bE9PXC0 Gm8436-201ENSMUST00000210152 1080 ntBASIC11.3□□□□□ -0.6
Srp54bE9PXC0 Gm5749-201ENSMUST00000210673 1090 ntBASIC11.3□□□□□ -0.6
Srp54bE9PXC0 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
Srp54bE9PXC0 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC11.3□□□□□ -0.6
Srp54bE9PXC0 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Srp54bE9PXC0 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Srp54bE9PXC0 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Srp54bE9PXC0 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC11.3□□□□□ -0.6
Srp54bE9PXC0 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Srp54bE9PXC0 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Srp54bE9PXC0 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Srp54bE9PXC0 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Srp54bE9PXC0 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Srp54bE9PXC0 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Srp54bE9PXC0 AC129336.1-201ENSMUST00000220224 2277 ntBASIC11.3□□□□□ -0.6
Srp54bE9PXC0 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Srp54bE9PXC0 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Srp54bE9PXC0 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Srp54bE9PXC0 Gm43868-201ENSMUST00000205187 2114 ntBASIC11.3□□□□□ -0.6
Srp54bE9PXC0 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Srp54bE9PXC0 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Srp54bE9PXC0 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Srp54bE9PXC0 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Srp54bE9PXC0 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Srp54bE9PXC0 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Srp54bE9PXC0 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Srp54bE9PXC0 Gm5740-201ENSMUST00000211003 1857 ntBASIC11.29□□□□□ -0.6
Srp54bE9PXC0 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC11.29□□□□□ -0.6
Srp54bE9PXC0 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Srp54bE9PXC0 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Srp54bE9PXC0 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC11.29□□□□□ -0.6
Srp54bE9PXC0 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Srp54bE9PXC0 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Srp54bE9PXC0 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.29□□□□□ -0.6
Srp54bE9PXC0 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Srp54bE9PXC0 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Srp54bE9PXC0 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Srp54bE9PXC0 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Srp54bE9PXC0 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Srp54bE9PXC0 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Srp54bE9PXC0 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms