Protein–RNA interactions for Protein: E9PUP3

Slc4a9, Anion exchange protein, mousemouse

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc4a9E9PUP3 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Slc4a9E9PUP3 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Slc4a9E9PUP3 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Slc4a9E9PUP3 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Slc4a9E9PUP3 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Slc4a9E9PUP3 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Slc4a9E9PUP3 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC13.34□□□□□ -0.27
Slc4a9E9PUP3 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Slc4a9E9PUP3 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Slc4a9E9PUP3 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Slc4a9E9PUP3 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC13.34□□□□□ -0.27
Slc4a9E9PUP3 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Slc4a9E9PUP3 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Slc4a9E9PUP3 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Slc4a9E9PUP3 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Slc4a9E9PUP3 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Slc4a9E9PUP3 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC13.34□□□□□ -0.27
Slc4a9E9PUP3 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Slc4a9E9PUP3 Gm5308-201ENSMUST00000196752 1354 ntBASIC13.33□□□□□ -0.27
Slc4a9E9PUP3 Klk1b5-201ENSMUST00000074359 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Slc4a9E9PUP3 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Slc4a9E9PUP3 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Slc4a9E9PUP3 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Slc4a9E9PUP3 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc4a9E9PUP3 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc4a9E9PUP3 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.33□□□□□ -0.28
Slc4a9E9PUP3 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC13.33□□□□□ -0.28
Slc4a9E9PUP3 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Slc4a9E9PUP3 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc4a9E9PUP3 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc4a9E9PUP3 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Slc4a9E9PUP3 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Slc4a9E9PUP3 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc4a9E9PUP3 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Slc4a9E9PUP3 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc4a9E9PUP3 Gm11540-201ENSMUST00000117457 780 ntBASIC13.33□□□□□ -0.28
Slc4a9E9PUP3 Tm6sf1-202ENSMUST00000119543 1066 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Slc4a9E9PUP3 Gm4705-201ENSMUST00000177415 354 ntBASIC13.33□□□□□ -0.28
Slc4a9E9PUP3 Gm26626-201ENSMUST00000180989 713 ntTSL 2 BASIC13.33□□□□□ -0.28
Slc4a9E9PUP3 Gm27444-201ENSMUST00000184157 137 ntBASIC13.33□□□□□ -0.28
Slc4a9E9PUP3 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Slc4a9E9PUP3 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Slc4a9E9PUP3 Gm31314-201ENSMUST00000201435 609 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Slc4a9E9PUP3 Gm45680-201ENSMUST00000211135 214 ntTSL 3 BASIC13.33□□□□□ -0.28
Slc4a9E9PUP3 AC129217.1-201ENSMUST00000225181 642 ntBASIC13.33□□□□□ -0.28
Slc4a9E9PUP3 Cenpx-201ENSMUST00000026137 692 ntTSL 2 BASIC13.33□□□□□ -0.28
Slc4a9E9PUP3 Rnasek-201ENSMUST00000040428 611 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc4a9E9PUP3 Defb29-201ENSMUST00000060598 462 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc4a9E9PUP3 Pgk1-rs7-201ENSMUST00000085735 1255 ntBASIC13.33□□□□□ -0.28
Slc4a9E9PUP3 Nutf2-ps1-201ENSMUST00000095978 864 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Slc4a9E9PUP3 Nt5dc1-202ENSMUST00000099973 761 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Slc4a9E9PUP3 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc4a9E9PUP3 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc4a9E9PUP3 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc4a9E9PUP3 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc4a9E9PUP3 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc4a9E9PUP3 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Slc4a9E9PUP3 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Slc4a9E9PUP3 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Slc4a9E9PUP3 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Slc4a9E9PUP3 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Slc4a9E9PUP3 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc4a9E9PUP3 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc4a9E9PUP3 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc4a9E9PUP3 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC13.32□□□□□ -0.28
Slc4a9E9PUP3 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Slc4a9E9PUP3 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc4a9E9PUP3 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc4a9E9PUP3 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc4a9E9PUP3 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc4a9E9PUP3 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc4a9E9PUP3 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc4a9E9PUP3 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Slc4a9E9PUP3 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Slc4a9E9PUP3 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC13.32□□□□□ -0.28
Slc4a9E9PUP3 Gm15579-201ENSMUST00000141299 757 ntTSL 3 BASIC13.32□□□□□ -0.28
Slc4a9E9PUP3 Ipcef1-209ENSMUST00000170680 1174 ntTSL 5 BASIC13.32□□□□□ -0.28
Slc4a9E9PUP3 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC13.32□□□□□ -0.28
Slc4a9E9PUP3 Stard6-206ENSMUST00000174118 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc4a9E9PUP3 Gm18733-202ENSMUST00000174447 401 ntBASIC13.32□□□□□ -0.28
Slc4a9E9PUP3 Gm5808-201ENSMUST00000178090 357 ntBASIC13.32□□□□□ -0.28
Slc4a9E9PUP3 Gm6216-201ENSMUST00000182390 687 ntBASIC13.32□□□□□ -0.28
Slc4a9E9PUP3 2810404M03Rik-201ENSMUST00000188324 1245 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Slc4a9E9PUP3 Gm29747-201ENSMUST00000194764 585 ntBASIC13.32□□□□□ -0.28
Slc4a9E9PUP3 Gm37709-201ENSMUST00000195074 600 ntBASIC13.32□□□□□ -0.28
Slc4a9E9PUP3 AC124613.1-201ENSMUST00000198711 88 ntBASIC13.32□□□□□ -0.28
Slc4a9E9PUP3 Ckb-ps2-201ENSMUST00000198886 1001 ntBASIC13.32□□□□□ -0.28
Slc4a9E9PUP3 Gm44353-201ENSMUST00000200618 138 ntBASIC13.32□□□□□ -0.28
Slc4a9E9PUP3 Chac2-201ENSMUST00000020553 1018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc4a9E9PUP3 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC13.32□□□□□ -0.28
Slc4a9E9PUP3 AC159205.7-201ENSMUST00000225988 692 ntBASIC13.32□□□□□ -0.28
Slc4a9E9PUP3 Tmsb15b2-201ENSMUST00000069803 450 ntTSL 2 BASIC13.32□□□□□ -0.28
Slc4a9E9PUP3 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc4a9E9PUP3 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc4a9E9PUP3 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Slc4a9E9PUP3 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC13.32□□□□□ -0.28
Slc4a9E9PUP3 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc4a9E9PUP3 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Slc4a9E9PUP3 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc4a9E9PUP3 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms