Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 AC151836.1-201ENSMUST00000228730 1637 ntBASIC15.82■□□□□ 0.12
Hfm1D3Z4R1 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Hfm1D3Z4R1 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hfm1D3Z4R1 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hfm1D3Z4R1 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hfm1D3Z4R1 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hfm1D3Z4R1 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Hfm1D3Z4R1 Bglap3-203ENSMUST00000107543 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hfm1D3Z4R1 Tmem181c-ps-201ENSMUST00000115772 1288 ntBASIC15.82■□□□□ 0.12
Hfm1D3Z4R1 Gm5764-201ENSMUST00000118817 885 ntBASIC15.82■□□□□ 0.12
Hfm1D3Z4R1 Junos-202ENSMUST00000125438 559 ntTSL 2 BASIC15.82■□□□□ 0.12
Hfm1D3Z4R1 Gm14004-201ENSMUST00000138875 590 ntTSL 2 BASIC15.82■□□□□ 0.12
Hfm1D3Z4R1 Gsdmcl2-202ENSMUST00000185391 796 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Hfm1D3Z4R1 Mt4-201ENSMUST00000034207 398 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hfm1D3Z4R1 Hspb11-201ENSMUST00000046558 608 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hfm1D3Z4R1 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hfm1D3Z4R1 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Hfm1D3Z4R1 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hfm1D3Z4R1 Msl1-202ENSMUST00000037930 1303 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Hfm1D3Z4R1 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hfm1D3Z4R1 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Hfm1D3Z4R1 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hfm1D3Z4R1 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hfm1D3Z4R1 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Hfm1D3Z4R1 Ap5s1-203ENSMUST00000110208 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hfm1D3Z4R1 Pigb-202ENSMUST00000098566 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hfm1D3Z4R1 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Hfm1D3Z4R1 Gm19027-201ENSMUST00000187291 1355 ntBASIC15.81■□□□□ 0.12
Hfm1D3Z4R1 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
Hfm1D3Z4R1 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hfm1D3Z4R1 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Hfm1D3Z4R1 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Hfm1D3Z4R1 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hfm1D3Z4R1 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC15.81■□□□□ 0.12
Hfm1D3Z4R1 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hfm1D3Z4R1 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hfm1D3Z4R1 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Hfm1D3Z4R1 Efna1-203ENSMUST00000118860 1403 ntTSL 5 BASIC15.81■□□□□ 0.12
Hfm1D3Z4R1 Paupar-201ENSMUST00000194826 3482 ntBASIC15.81■□□□□ 0.12
Hfm1D3Z4R1 Lyrm1-202ENSMUST00000106516 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hfm1D3Z4R1 Gm12470-201ENSMUST00000117239 1049 ntBASIC15.81■□□□□ 0.12
Hfm1D3Z4R1 Gm5510-201ENSMUST00000117826 486 ntBASIC15.81■□□□□ 0.12
Hfm1D3Z4R1 Gm15636-201ENSMUST00000119205 668 ntBASIC15.81■□□□□ 0.12
Hfm1D3Z4R1 Mir8111-201ENSMUST00000184463 137 ntBASIC15.81■□□□□ 0.12
Hfm1D3Z4R1 Gm37858-201ENSMUST00000192759 1231 ntBASIC15.81■□□□□ 0.12
Hfm1D3Z4R1 Gm6677-201ENSMUST00000195100 441 ntBASIC15.81■□□□□ 0.12
Hfm1D3Z4R1 4930486N12Rik-201ENSMUST00000206668 632 ntBASIC15.81■□□□□ 0.12
Hfm1D3Z4R1 Gm3926-201ENSMUST00000223378 1123 ntBASIC15.81■□□□□ 0.12
Hfm1D3Z4R1 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hfm1D3Z4R1 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hfm1D3Z4R1 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC15.81■□□□□ 0.12
Hfm1D3Z4R1 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hfm1D3Z4R1 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hfm1D3Z4R1 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hfm1D3Z4R1 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Hfm1D3Z4R1 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Hfm1D3Z4R1 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hfm1D3Z4R1 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hfm1D3Z4R1 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hfm1D3Z4R1 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hfm1D3Z4R1 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC15.81■□□□□ 0.12
Hfm1D3Z4R1 Gm9544-201ENSMUST00000223349 2482 ntBASIC15.81■□□□□ 0.12
Hfm1D3Z4R1 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hfm1D3Z4R1 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hfm1D3Z4R1 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC15.8■□□□□ 0.12
Hfm1D3Z4R1 Gm33366-201ENSMUST00000195583 3827 ntBASIC15.8■□□□□ 0.12
Hfm1D3Z4R1 Gm8094-201ENSMUST00000165136 1408 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Hfm1D3Z4R1 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hfm1D3Z4R1 Eloc-208ENSMUST00000188641 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hfm1D3Z4R1 Gm15658-201ENSMUST00000148293 574 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Hfm1D3Z4R1 Has2os-202ENSMUST00000163314 633 ntTSL 3 BASIC15.8■□□□□ 0.12
Hfm1D3Z4R1 Gm28505-201ENSMUST00000190466 680 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Hfm1D3Z4R1 Gm44420-201ENSMUST00000203669 490 ntBASIC15.8■□□□□ 0.12
Hfm1D3Z4R1 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hfm1D3Z4R1 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC15.8■□□□□ 0.12
Hfm1D3Z4R1 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Hfm1D3Z4R1 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hfm1D3Z4R1 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hfm1D3Z4R1 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hfm1D3Z4R1 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hfm1D3Z4R1 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hfm1D3Z4R1 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
Hfm1D3Z4R1 Gm26818-201ENSMUST00000181367 1360 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Hfm1D3Z4R1 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hfm1D3Z4R1 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hfm1D3Z4R1 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hfm1D3Z4R1 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hfm1D3Z4R1 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hfm1D3Z4R1 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC15.79■□□□□ 0.12
Hfm1D3Z4R1 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hfm1D3Z4R1 Gm13192-201ENSMUST00000101199 208 ntBASIC15.79■□□□□ 0.12
Hfm1D3Z4R1 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Hfm1D3Z4R1 Focad-202ENSMUST00000107147 1177 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Hfm1D3Z4R1 Gm10443-201ENSMUST00000119024 210 ntBASIC15.79■□□□□ 0.12
Hfm1D3Z4R1 7330404K18Rik-201ENSMUST00000125558 487 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Hfm1D3Z4R1 Gm17207-201ENSMUST00000168686 645 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Hfm1D3Z4R1 Tcl1-203ENSMUST00000175652 535 ntTSL 2 BASIC15.79■□□□□ 0.12
Hfm1D3Z4R1 Tcstv1-201ENSMUST00000178510 1280 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Hfm1D3Z4R1 Gm26875-201ENSMUST00000181006 950 ntBASIC15.79■□□□□ 0.12
Hfm1D3Z4R1 Arl14-201ENSMUST00000183126 1200 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms