Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col4a6B1AVK5 Ms4a6b-201ENSMUST00000025580 1687 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col4a6B1AVK5 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC11.54□□□□□ -0.56
Col4a6B1AVK5 Ccna1-204ENSMUST00000198320 1564 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col4a6B1AVK5 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col4a6B1AVK5 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col4a6B1AVK5 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC11.54□□□□□ -0.56
Col4a6B1AVK5 Srd5a3-203ENSMUST00000113507 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col4a6B1AVK5 AC107763.1-201ENSMUST00000226082 1365 ntBASIC11.54□□□□□ -0.56
Col4a6B1AVK5 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col4a6B1AVK5 Rplp0-ps1-201ENSMUST00000122125 933 ntBASIC11.54□□□□□ -0.56
Col4a6B1AVK5 Aamdc-209ENSMUST00000144858 380 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Col4a6B1AVK5 Gm37988-201ENSMUST00000155020 825 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Col4a6B1AVK5 Gm26174-201ENSMUST00000158415 219 ntBASIC11.54□□□□□ -0.56
Col4a6B1AVK5 1700085C21Rik-201ENSMUST00000187123 1082 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Col4a6B1AVK5 Gm8226-201ENSMUST00000190511 798 ntBASIC11.54□□□□□ -0.56
Col4a6B1AVK5 Fcer2a-205ENSMUST00000208145 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col4a6B1AVK5 AC154477.1-201ENSMUST00000226515 773 ntBASIC11.54□□□□□ -0.56
Col4a6B1AVK5 BX649293.1-201ENSMUST00000227437 631 ntBASIC11.54□□□□□ -0.56
Col4a6B1AVK5 AC137842.2-201ENSMUST00000227734 797 ntBASIC11.54□□□□□ -0.56
Col4a6B1AVK5 Gimap7-201ENSMUST00000052503 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col4a6B1AVK5 Iah1-201ENSMUST00000076813 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col4a6B1AVK5 Sectm1b-202ENSMUST00000081499 1222 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Col4a6B1AVK5 Gm37058-201ENSMUST00000193393 1644 ntBASIC11.54□□□□□ -0.56
Col4a6B1AVK5 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Col4a6B1AVK5 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Col4a6B1AVK5 AC122273.1-201ENSMUST00000213634 2327 ntBASIC11.54□□□□□ -0.56
Col4a6B1AVK5 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col4a6B1AVK5 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC11.54□□□□□ -0.56
Col4a6B1AVK5 Stx17-203ENSMUST00000107721 1771 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Col4a6B1AVK5 Msl1-202ENSMUST00000037930 1303 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Col4a6B1AVK5 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Col4a6B1AVK5 Slc10a1-201ENSMUST00000095572 1674 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col4a6B1AVK5 Gm38111-201ENSMUST00000194817 2741 ntBASIC11.54□□□□□ -0.56
Col4a6B1AVK5 Atp5s-204ENSMUST00000220916 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col4a6B1AVK5 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col4a6B1AVK5 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col4a6B1AVK5 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col4a6B1AVK5 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Col4a6B1AVK5 Gstm4-203ENSMUST00000178808 1462 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Col4a6B1AVK5 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Col4a6B1AVK5 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col4a6B1AVK5 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Col4a6B1AVK5 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col4a6B1AVK5 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col4a6B1AVK5 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col4a6B1AVK5 Gm15815-201ENSMUST00000120569 255 ntBASIC11.53□□□□□ -0.56
Col4a6B1AVK5 Ppt1-204ENSMUST00000121870 986 ntTSL 2 BASIC11.53□□□□□ -0.56
Col4a6B1AVK5 Bola3-203ENSMUST00000122216 554 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Col4a6B1AVK5 3010001F23Rik-201ENSMUST00000130625 876 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Col4a6B1AVK5 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Col4a6B1AVK5 Gm24346-201ENSMUST00000158712 194 ntBASIC11.53□□□□□ -0.56
Col4a6B1AVK5 Fbxo16-201ENSMUST00000169656 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col4a6B1AVK5 Gm21958-201ENSMUST00000178832 648 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Col4a6B1AVK5 Arl14-201ENSMUST00000183126 1200 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Col4a6B1AVK5 Zcwpw2-203ENSMUST00000187803 372 ntBASIC11.53□□□□□ -0.56
Col4a6B1AVK5 Gm37851-201ENSMUST00000193871 889 ntBASIC11.53□□□□□ -0.56
Col4a6B1AVK5 Fgfbp1-203ENSMUST00000199894 1228 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
Col4a6B1AVK5 Gm44420-201ENSMUST00000203669 490 ntBASIC11.53□□□□□ -0.56
Col4a6B1AVK5 AC117769.1-201ENSMUST00000224716 1120 ntBASIC11.53□□□□□ -0.56
Col4a6B1AVK5 CT025679.1-201ENSMUST00000227106 449 ntBASIC11.53□□□□□ -0.56
Col4a6B1AVK5 Ttc24-202ENSMUST00000064550 671 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Col4a6B1AVK5 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Col4a6B1AVK5 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col4a6B1AVK5 Arrb2-201ENSMUST00000079056 1443 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Col4a6B1AVK5 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col4a6B1AVK5 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col4a6B1AVK5 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col4a6B1AVK5 Gm7405-201ENSMUST00000121476 1337 ntBASIC11.53□□□□□ -0.56
Col4a6B1AVK5 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Col4a6B1AVK5 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col4a6B1AVK5 Gm31138-201ENSMUST00000212296 1705 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Col4a6B1AVK5 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC11.53□□□□□ -0.56
Col4a6B1AVK5 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Col4a6B1AVK5 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Col4a6B1AVK5 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Col4a6B1AVK5 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Col4a6B1AVK5 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col4a6B1AVK5 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col4a6B1AVK5 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col4a6B1AVK5 Cep70-207ENSMUST00000190715 1768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col4a6B1AVK5 AC153524.2-202ENSMUST00000220401 1794 ntBASIC11.53□□□□□ -0.56
Col4a6B1AVK5 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col4a6B1AVK5 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col4a6B1AVK5 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Col4a6B1AVK5 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Col4a6B1AVK5 Camk2a-204ENSMUST00000115295 979 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Col4a6B1AVK5 Cdk1-202ENSMUST00000119827 1253 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Col4a6B1AVK5 Gm15746-201ENSMUST00000120684 1027 ntBASIC11.52□□□□□ -0.56
Col4a6B1AVK5 Gm14004-201ENSMUST00000138875 590 ntTSL 2 BASIC11.52□□□□□ -0.56
Col4a6B1AVK5 Eef1d-217ENSMUST00000151066 704 ntTSL 5 BASIC11.52□□□□□ -0.56
Col4a6B1AVK5 Olfr527-201ENSMUST00000172230 978 ntAPPRIS P1 BASIC11.52□□□□□ -0.56
Col4a6B1AVK5 Gm5976-201ENSMUST00000180794 996 ntBASIC11.52□□□□□ -0.56
Col4a6B1AVK5 Gm28505-201ENSMUST00000190466 680 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Col4a6B1AVK5 Gm19990-201ENSMUST00000219468 1224 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Col4a6B1AVK5 AC116797.2-202ENSMUST00000223587 1017 ntBASIC11.52□□□□□ -0.56
Col4a6B1AVK5 AC187103.3-201ENSMUST00000225725 646 ntBASIC11.52□□□□□ -0.56
Col4a6B1AVK5 Cd300c2-201ENSMUST00000092464 1187 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Col4a6B1AVK5 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Col4a6B1AVK5 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms