Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
H2afb3S4R1G7 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
H2afb3S4R1G7 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC10.31□□□□□ -0.76
H2afb3S4R1G7 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
H2afb3S4R1G7 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC10.31□□□□□ -0.76
H2afb3S4R1G7 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC10.31□□□□□ -0.76
H2afb3S4R1G7 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
H2afb3S4R1G7 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC10.31□□□□□ -0.76
H2afb3S4R1G7 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
H2afb3S4R1G7 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC10.31□□□□□ -0.76
H2afb3S4R1G7 Mir8093-201ENSMUST00000185043 137 ntBASIC10.31□□□□□ -0.76
H2afb3S4R1G7 Gm44967-201ENSMUST00000207047 631 ntBASIC10.31□□□□□ -0.76
H2afb3S4R1G7 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
H2afb3S4R1G7 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
H2afb3S4R1G7 Gm26448-201ENSMUST00000082446 203 ntBASIC10.31□□□□□ -0.76
H2afb3S4R1G7 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
H2afb3S4R1G7 Slc38a3-203ENSMUST00000177567 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
H2afb3S4R1G7 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
H2afb3S4R1G7 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
H2afb3S4R1G7 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
H2afb3S4R1G7 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
H2afb3S4R1G7 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
H2afb3S4R1G7 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC10.31□□□□□ -0.76
H2afb3S4R1G7 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
H2afb3S4R1G7 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
H2afb3S4R1G7 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
H2afb3S4R1G7 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
H2afb3S4R1G7 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
H2afb3S4R1G7 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
H2afb3S4R1G7 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
H2afb3S4R1G7 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
H2afb3S4R1G7 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
H2afb3S4R1G7 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
H2afb3S4R1G7 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
H2afb3S4R1G7 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
H2afb3S4R1G7 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
H2afb3S4R1G7 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
H2afb3S4R1G7 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
H2afb3S4R1G7 AC121870.2-201ENSMUST00000214343 1870 ntBASIC10.3□□□□□ -0.76
H2afb3S4R1G7 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC10.3□□□□□ -0.76
H2afb3S4R1G7 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
H2afb3S4R1G7 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
H2afb3S4R1G7 Gm18806-201ENSMUST00000207607 1775 ntBASIC10.3□□□□□ -0.76
H2afb3S4R1G7 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
H2afb3S4R1G7 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
H2afb3S4R1G7 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC10.3□□□□□ -0.76
H2afb3S4R1G7 Gm15207-201ENSMUST00000119259 442 ntBASIC10.3□□□□□ -0.76
H2afb3S4R1G7 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
H2afb3S4R1G7 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC10.3□□□□□ -0.76
H2afb3S4R1G7 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
H2afb3S4R1G7 Gm5616-201ENSMUST00000165252 384 ntBASIC10.3□□□□□ -0.76
H2afb3S4R1G7 Gm8741-201ENSMUST00000174736 384 ntBASIC10.3□□□□□ -0.76
H2afb3S4R1G7 Gm28071-201ENSMUST00000190355 478 ntBASIC10.3□□□□□ -0.76
H2afb3S4R1G7 Gm5982-201ENSMUST00000196234 512 ntBASIC10.3□□□□□ -0.76
H2afb3S4R1G7 Gm18038-201ENSMUST00000197900 485 ntBASIC10.3□□□□□ -0.76
H2afb3S4R1G7 Gm43758-201ENSMUST00000199500 367 ntBASIC10.3□□□□□ -0.76
H2afb3S4R1G7 Gm7118-201ENSMUST00000200167 1003 ntBASIC10.3□□□□□ -0.76
H2afb3S4R1G7 Gm45224-201ENSMUST00000208203 414 ntBASIC10.3□□□□□ -0.76
H2afb3S4R1G7 AC159896.2-201ENSMUST00000214753 269 ntBASIC10.3□□□□□ -0.76
H2afb3S4R1G7 AC154319.1-201ENSMUST00000216330 312 ntBASIC10.3□□□□□ -0.76
H2afb3S4R1G7 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
H2afb3S4R1G7 Gm9797-202ENSMUST00000218003 294 ntBASIC10.3□□□□□ -0.76
H2afb3S4R1G7 Gm7940-201ENSMUST00000218195 769 ntBASIC10.3□□□□□ -0.76
H2afb3S4R1G7 AL589735.1-201ENSMUST00000224353 270 ntBASIC10.3□□□□□ -0.76
H2afb3S4R1G7 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
H2afb3S4R1G7 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
H2afb3S4R1G7 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
H2afb3S4R1G7 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
H2afb3S4R1G7 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
H2afb3S4R1G7 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
H2afb3S4R1G7 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
H2afb3S4R1G7 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
H2afb3S4R1G7 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
H2afb3S4R1G7 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC10.3□□□□□ -0.76
H2afb3S4R1G7 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
H2afb3S4R1G7 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
H2afb3S4R1G7 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
H2afb3S4R1G7 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
H2afb3S4R1G7 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
H2afb3S4R1G7 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC10.3□□□□□ -0.76
H2afb3S4R1G7 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
H2afb3S4R1G7 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
H2afb3S4R1G7 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC10.3□□□□□ -0.76
H2afb3S4R1G7 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
H2afb3S4R1G7 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
H2afb3S4R1G7 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
H2afb3S4R1G7 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
H2afb3S4R1G7 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
H2afb3S4R1G7 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
H2afb3S4R1G7 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
H2afb3S4R1G7 Gm11661-201ENSMUST00000121761 1327 ntBASIC10.3□□□□□ -0.76
H2afb3S4R1G7 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
H2afb3S4R1G7 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC10.3□□□□□ -0.76
H2afb3S4R1G7 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
H2afb3S4R1G7 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
H2afb3S4R1G7 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
H2afb3S4R1G7 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
H2afb3S4R1G7 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
H2afb3S4R1G7 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
H2afb3S4R1G7 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms