Protein–RNA interactions for Protein: Q9JM73

Srf, Serum response factor, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SrfQ9JM73 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SrfQ9JM73 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
SrfQ9JM73 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.02□□□□□ -0.64
SrfQ9JM73 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
SrfQ9JM73 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC11.02□□□□□ -0.64
SrfQ9JM73 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
SrfQ9JM73 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.02□□□□□ -0.64
SrfQ9JM73 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
SrfQ9JM73 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
SrfQ9JM73 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
SrfQ9JM73 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
SrfQ9JM73 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.02□□□□□ -0.64
SrfQ9JM73 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SrfQ9JM73 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
SrfQ9JM73 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
SrfQ9JM73 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
SrfQ9JM73 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
SrfQ9JM73 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
SrfQ9JM73 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
SrfQ9JM73 A330043C09Rik-201ENSMUST00000139823 1009 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
SrfQ9JM73 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC11.02□□□□□ -0.65
SrfQ9JM73 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC11.02□□□□□ -0.65
SrfQ9JM73 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
SrfQ9JM73 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
SrfQ9JM73 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.02□□□□□ -0.65
SrfQ9JM73 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC11.02□□□□□ -0.65
SrfQ9JM73 Mir7051-201ENSMUST00000184167 73 ntBASIC11.02□□□□□ -0.65
SrfQ9JM73 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
SrfQ9JM73 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
SrfQ9JM73 Gm42452-201ENSMUST00000199749 617 ntBASIC11.02□□□□□ -0.65
SrfQ9JM73 Gm42655-201ENSMUST00000202782 1134 ntBASIC11.02□□□□□ -0.65
SrfQ9JM73 Gm44332-201ENSMUST00000203712 433 ntBASIC11.02□□□□□ -0.65
SrfQ9JM73 Gm43912-201ENSMUST00000204352 538 ntBASIC11.02□□□□□ -0.65
SrfQ9JM73 Olfr1449-204ENSMUST00000215325 1149 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
SrfQ9JM73 1700124M09Rik-201ENSMUST00000217047 305 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
SrfQ9JM73 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
SrfQ9JM73 AC154515.3-201ENSMUST00000225081 1159 ntBASIC11.02□□□□□ -0.65
SrfQ9JM73 Prl8a9-201ENSMUST00000006662 942 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SrfQ9JM73 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
SrfQ9JM73 Olfr811-201ENSMUST00000076437 960 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
SrfQ9JM73 Olfr1180-201ENSMUST00000099824 1063 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
SrfQ9JM73 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
SrfQ9JM73 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SrfQ9JM73 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC11.02□□□□□ -0.65
SrfQ9JM73 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC11.02□□□□□ -0.65
SrfQ9JM73 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
SrfQ9JM73 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
SrfQ9JM73 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
SrfQ9JM73 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SrfQ9JM73 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SrfQ9JM73 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC11.02□□□□□ -0.65
SrfQ9JM73 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SrfQ9JM73 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
SrfQ9JM73 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SrfQ9JM73 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SrfQ9JM73 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SrfQ9JM73 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SrfQ9JM73 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SrfQ9JM73 Gm44190-201ENSMUST00000205083 1401 ntBASIC11.01□□□□□ -0.65
SrfQ9JM73 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC11.01□□□□□ -0.65
SrfQ9JM73 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
SrfQ9JM73 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SrfQ9JM73 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
SrfQ9JM73 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SrfQ9JM73 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
SrfQ9JM73 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC11.01□□□□□ -0.65
SrfQ9JM73 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SrfQ9JM73 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SrfQ9JM73 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
SrfQ9JM73 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SrfQ9JM73 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SrfQ9JM73 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SrfQ9JM73 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC11.01□□□□□ -0.65
SrfQ9JM73 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC11.01□□□□□ -0.65
SrfQ9JM73 B4galt4-203ENSMUST00000114710 837 ntTSL 3 BASIC11.01□□□□□ -0.65
SrfQ9JM73 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC11.01□□□□□ -0.65
SrfQ9JM73 Gm15003-201ENSMUST00000118884 446 ntBASIC11.01□□□□□ -0.65
SrfQ9JM73 Gm11502-201ENSMUST00000120917 1211 ntBASIC11.01□□□□□ -0.65
SrfQ9JM73 Gm12591-201ENSMUST00000122407 1177 ntBASIC11.01□□□□□ -0.65
SrfQ9JM73 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SrfQ9JM73 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SrfQ9JM73 Gm6047-201ENSMUST00000167221 574 ntBASIC11.01□□□□□ -0.65
SrfQ9JM73 Gm3573-201ENSMUST00000168673 898 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
SrfQ9JM73 Gm17192-201ENSMUST00000169031 511 ntBASIC11.01□□□□□ -0.65
SrfQ9JM73 Gm3486-201ENSMUST00000169361 883 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SrfQ9JM73 Gm4181-201ENSMUST00000170249 898 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SrfQ9JM73 Gm18201-201ENSMUST00000174735 875 ntBASIC11.01□□□□□ -0.65
SrfQ9JM73 Gm23694-201ENSMUST00000179335 110 ntBASIC11.01□□□□□ -0.65
SrfQ9JM73 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SrfQ9JM73 Gm28221-201ENSMUST00000185617 347 ntTSL 5 BASIC11.01□□□□□ -0.65
SrfQ9JM73 Mpzl1-203ENSMUST00000191818 853 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SrfQ9JM73 Gm37867-201ENSMUST00000192066 1059 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SrfQ9JM73 Ighv1-2-201ENSMUST00000195325 378 ntBASIC11.01□□□□□ -0.65
SrfQ9JM73 Gm42591-201ENSMUST00000197249 700 ntBASIC11.01□□□□□ -0.65
SrfQ9JM73 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
SrfQ9JM73 4933402C06Rik-203ENSMUST00000207559 1227 ntTSL 5 BASIC11.01□□□□□ -0.65
SrfQ9JM73 AC124569.4-201ENSMUST00000223830 1220 ntBASIC11.01□□□□□ -0.65
SrfQ9JM73 AC117949.2-201ENSMUST00000225900 584 ntBASIC11.01□□□□□ -0.65
SrfQ9JM73 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SrfQ9JM73 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms