Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cdc40Q9DC48 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC10.67□□□□□ -0.7
Cdc40Q9DC48 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC10.67□□□□□ -0.7
Cdc40Q9DC48 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC10.67□□□□□ -0.7
Cdc40Q9DC48 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC10.67□□□□□ -0.7
Cdc40Q9DC48 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdc40Q9DC48 AC134860.1-201ENSMUST00000224867 660 ntBASIC10.67□□□□□ -0.7
Cdc40Q9DC48 AC171241.1-201ENSMUST00000228144 1166 ntBASIC10.67□□□□□ -0.7
Cdc40Q9DC48 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdc40Q9DC48 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Cdc40Q9DC48 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC10.67□□□□□ -0.7
Cdc40Q9DC48 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdc40Q9DC48 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdc40Q9DC48 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdc40Q9DC48 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Cdc40Q9DC48 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdc40Q9DC48 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdc40Q9DC48 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC10.67□□□□□ -0.7
Cdc40Q9DC48 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Cdc40Q9DC48 AC167022.1-201ENSMUST00000218647 1458 ntBASIC10.67□□□□□ -0.7
Cdc40Q9DC48 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdc40Q9DC48 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC10.67□□□□□ -0.7
Cdc40Q9DC48 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cdc40Q9DC48 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdc40Q9DC48 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC10.67□□□□□ -0.7
Cdc40Q9DC48 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdc40Q9DC48 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cdc40Q9DC48 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC10.67□□□□□ -0.7
Cdc40Q9DC48 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Cdc40Q9DC48 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cdc40Q9DC48 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdc40Q9DC48 Gm18986-201ENSMUST00000216029 1986 ntBASIC10.66□□□□□ -0.7
Cdc40Q9DC48 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdc40Q9DC48 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdc40Q9DC48 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdc40Q9DC48 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdc40Q9DC48 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Cdc40Q9DC48 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
Cdc40Q9DC48 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdc40Q9DC48 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC10.66□□□□□ -0.7
Cdc40Q9DC48 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Cdc40Q9DC48 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Cdc40Q9DC48 Gm21998-201ENSMUST00000117552 1308 ntBASIC10.66□□□□□ -0.7
Cdc40Q9DC48 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdc40Q9DC48 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Cdc40Q9DC48 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Cdc40Q9DC48 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdc40Q9DC48 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC10.66□□□□□ -0.7
Cdc40Q9DC48 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Cdc40Q9DC48 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Cdc40Q9DC48 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Cdc40Q9DC48 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdc40Q9DC48 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdc40Q9DC48 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
Cdc40Q9DC48 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
Cdc40Q9DC48 Gm15207-201ENSMUST00000119259 442 ntBASIC10.66□□□□□ -0.7
Cdc40Q9DC48 Gm13263-201ENSMUST00000121271 838 ntBASIC10.66□□□□□ -0.7
Cdc40Q9DC48 Gm14460-201ENSMUST00000121511 639 ntBASIC10.66□□□□□ -0.7
Cdc40Q9DC48 Gm12208-201ENSMUST00000122004 163 ntBASIC10.66□□□□□ -0.7
Cdc40Q9DC48 Gm15881-201ENSMUST00000148792 942 ntBASIC10.66□□□□□ -0.7
Cdc40Q9DC48 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Cdc40Q9DC48 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC10.66□□□□□ -0.7
Cdc40Q9DC48 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC10.66□□□□□ -0.7
Cdc40Q9DC48 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC10.66□□□□□ -0.7
Cdc40Q9DC48 Gm38117-201ENSMUST00000194653 939 ntBASIC10.66□□□□□ -0.7
Cdc40Q9DC48 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Cdc40Q9DC48 Gm6450-201ENSMUST00000200896 574 ntBASIC10.66□□□□□ -0.7
Cdc40Q9DC48 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Cdc40Q9DC48 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Cdc40Q9DC48 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdc40Q9DC48 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Cdc40Q9DC48 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdc40Q9DC48 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdc40Q9DC48 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdc40Q9DC48 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Cdc40Q9DC48 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Cdc40Q9DC48 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdc40Q9DC48 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cdc40Q9DC48 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Cdc40Q9DC48 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC10.66□□□□□ -0.7
Cdc40Q9DC48 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cdc40Q9DC48 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cdc40Q9DC48 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC10.65□□□□□ -0.7
Cdc40Q9DC48 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cdc40Q9DC48 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC10.65□□□□□ -0.7
Cdc40Q9DC48 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cdc40Q9DC48 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cdc40Q9DC48 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cdc40Q9DC48 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cdc40Q9DC48 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cdc40Q9DC48 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cdc40Q9DC48 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cdc40Q9DC48 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC10.65□□□□□ -0.7
Cdc40Q9DC48 Gm13916-201ENSMUST00000117368 628 ntBASIC10.65□□□□□ -0.7
Cdc40Q9DC48 Gm8815-201ENSMUST00000173809 620 ntBASIC10.65□□□□□ -0.7
Cdc40Q9DC48 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Cdc40Q9DC48 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC10.65□□□□□ -0.7
Cdc40Q9DC48 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC10.65□□□□□ -0.7
Cdc40Q9DC48 Gm28937-201ENSMUST00000185413 695 ntBASIC10.65□□□□□ -0.7
Cdc40Q9DC48 Gm29400-201ENSMUST00000187208 695 ntBASIC10.65□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms