Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Gm16219-201ENSMUST00000120096 274 ntBASIC15.02■□□□□ -0
U2af1Q9D883 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC15.02■□□□□ -0
U2af1Q9D883 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC15.02■□□□□ -0
U2af1Q9D883 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC15.02■□□□□ -0
U2af1Q9D883 Gm5342-201ENSMUST00000181982 1003 ntBASIC15.02■□□□□ -0
U2af1Q9D883 Mir7051-201ENSMUST00000184167 73 ntBASIC15.02■□□□□ -0
U2af1Q9D883 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC15.02■□□□□ -0
U2af1Q9D883 Gm37284-201ENSMUST00000193607 539 ntBASIC15.02■□□□□ -0
U2af1Q9D883 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
U2af1Q9D883 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
U2af1Q9D883 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC15.02■□□□□ -0
U2af1Q9D883 AC124433.1-201ENSMUST00000224483 1063 ntBASIC15.02■□□□□ -0
U2af1Q9D883 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
U2af1Q9D883 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC15.02■□□□□ -0
U2af1Q9D883 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
U2af1Q9D883 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
U2af1Q9D883 Mirlet7i-201ENSMUST00000083472 85 ntBASIC15.02■□□□□ -0
U2af1Q9D883 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC15.02□□□□□ -0.01
U2af1Q9D883 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
U2af1Q9D883 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC15.02□□□□□ -0.01
U2af1Q9D883 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
U2af1Q9D883 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
U2af1Q9D883 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
U2af1Q9D883 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
U2af1Q9D883 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
U2af1Q9D883 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
U2af1Q9D883 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
U2af1Q9D883 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
U2af1Q9D883 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
U2af1Q9D883 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
U2af1Q9D883 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
U2af1Q9D883 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
U2af1Q9D883 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
U2af1Q9D883 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
U2af1Q9D883 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
U2af1Q9D883 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
U2af1Q9D883 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
U2af1Q9D883 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
U2af1Q9D883 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
U2af1Q9D883 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
U2af1Q9D883 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
U2af1Q9D883 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC15.01□□□□□ -0.01
U2af1Q9D883 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
U2af1Q9D883 Gm8899-201ENSMUST00000214635 1332 ntBASIC15.01□□□□□ -0.01
U2af1Q9D883 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
U2af1Q9D883 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
U2af1Q9D883 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
U2af1Q9D883 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
U2af1Q9D883 Gm26013-201ENSMUST00000104404 119 ntBASIC15.01□□□□□ -0.01
U2af1Q9D883 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
U2af1Q9D883 Gm14740-201ENSMUST00000118538 1150 ntBASIC15.01□□□□□ -0.01
U2af1Q9D883 Gm12516-201ENSMUST00000120819 385 ntBASIC15.01□□□□□ -0.01
U2af1Q9D883 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC15.01□□□□□ -0.01
U2af1Q9D883 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC15.01□□□□□ -0.01
U2af1Q9D883 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC15.01□□□□□ -0.01
U2af1Q9D883 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
U2af1Q9D883 Gm18159-201ENSMUST00000174516 1070 ntBASIC15.01□□□□□ -0.01
U2af1Q9D883 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC15.01□□□□□ -0.01
U2af1Q9D883 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC15.01□□□□□ -0.01
U2af1Q9D883 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
U2af1Q9D883 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC15.01□□□□□ -0.01
U2af1Q9D883 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
U2af1Q9D883 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
U2af1Q9D883 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
U2af1Q9D883 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
U2af1Q9D883 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
U2af1Q9D883 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
U2af1Q9D883 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
U2af1Q9D883 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
U2af1Q9D883 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC15.01□□□□□ -0.01
U2af1Q9D883 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
U2af1Q9D883 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
U2af1Q9D883 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
U2af1Q9D883 Gm18806-201ENSMUST00000207607 1775 ntBASIC15.01□□□□□ -0.01
U2af1Q9D883 AC122860.2-201ENSMUST00000217967 2671 ntBASIC15□□□□□ -0.01
U2af1Q9D883 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC15□□□□□ -0.01
U2af1Q9D883 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
U2af1Q9D883 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
U2af1Q9D883 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
U2af1Q9D883 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC15□□□□□ -0.01
U2af1Q9D883 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
U2af1Q9D883 Gm43127-201ENSMUST00000195890 2789 ntBASIC15□□□□□ -0.01
U2af1Q9D883 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
U2af1Q9D883 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
U2af1Q9D883 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
U2af1Q9D883 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
U2af1Q9D883 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC15□□□□□ -0.01
U2af1Q9D883 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC15□□□□□ -0.01
U2af1Q9D883 Gm15528-201ENSMUST00000117821 864 ntBASIC15□□□□□ -0.01
U2af1Q9D883 Gm15617-201ENSMUST00000118973 771 ntBASIC15□□□□□ -0.01
U2af1Q9D883 n-R5s84-201ENSMUST00000122591 109 ntBASIC15□□□□□ -0.01
U2af1Q9D883 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
U2af1Q9D883 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
U2af1Q9D883 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC15□□□□□ -0.01
U2af1Q9D883 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC15□□□□□ -0.01
U2af1Q9D883 Gm29067-201ENSMUST00000190821 470 ntBASIC15□□□□□ -0.01
U2af1Q9D883 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC15□□□□□ -0.01
U2af1Q9D883 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC15□□□□□ -0.01
U2af1Q9D883 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
U2af1Q9D883 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms