Protein–RNA interactions for Protein: Q9D3S3

Snx29, Sorting nexin-29, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx29Q9D3S3 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Snx29Q9D3S3 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Snx29Q9D3S3 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Snx29Q9D3S3 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.55□□□□□ -0.4
Snx29Q9D3S3 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Snx29Q9D3S3 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Snx29Q9D3S3 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Snx29Q9D3S3 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Snx29Q9D3S3 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Snx29Q9D3S3 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Snx29Q9D3S3 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Snx29Q9D3S3 Snord23-201ENSMUST00000116828 109 ntBASIC12.55□□□□□ -0.4
Snx29Q9D3S3 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Snx29Q9D3S3 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Snx29Q9D3S3 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Snx29Q9D3S3 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC12.55□□□□□ -0.4
Snx29Q9D3S3 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Snx29Q9D3S3 Gm19013-201ENSMUST00000183895 1222 ntBASIC12.55□□□□□ -0.4
Snx29Q9D3S3 Gm19014-201ENSMUST00000184828 1189 ntBASIC12.55□□□□□ -0.4
Snx29Q9D3S3 Gm34379-201ENSMUST00000195036 290 ntBASIC12.55□□□□□ -0.4
Snx29Q9D3S3 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Snx29Q9D3S3 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Snx29Q9D3S3 AC129975.1-201ENSMUST00000224816 592 ntBASIC12.55□□□□□ -0.4
Snx29Q9D3S3 AC159002.1-201ENSMUST00000226714 924 ntBASIC12.55□□□□□ -0.4
Snx29Q9D3S3 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Snx29Q9D3S3 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Snx29Q9D3S3 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Snx29Q9D3S3 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Snx29Q9D3S3 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Snx29Q9D3S3 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Snx29Q9D3S3 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Snx29Q9D3S3 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Snx29Q9D3S3 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
Snx29Q9D3S3 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Snx29Q9D3S3 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.55□□□□□ -0.4
Snx29Q9D3S3 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.55□□□□□ -0.4
Snx29Q9D3S3 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC12.55□□□□□ -0.4
Snx29Q9D3S3 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC12.55□□□□□ -0.4
Snx29Q9D3S3 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Snx29Q9D3S3 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Snx29Q9D3S3 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Snx29Q9D3S3 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Snx29Q9D3S3 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Snx29Q9D3S3 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Snx29Q9D3S3 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Snx29Q9D3S3 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Snx29Q9D3S3 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Snx29Q9D3S3 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Snx29Q9D3S3 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Snx29Q9D3S3 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Snx29Q9D3S3 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Snx29Q9D3S3 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Snx29Q9D3S3 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Snx29Q9D3S3 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Snx29Q9D3S3 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Snx29Q9D3S3 Smok4a-201ENSMUST00000074512 1455 ntBASIC12.54□□□□□ -0.4
Snx29Q9D3S3 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Snx29Q9D3S3 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
Snx29Q9D3S3 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Snx29Q9D3S3 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Snx29Q9D3S3 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Snx29Q9D3S3 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Snx29Q9D3S3 Gm23612-201ENSMUST00000103823 110 ntBASIC12.54□□□□□ -0.4
Snx29Q9D3S3 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC12.54□□□□□ -0.4
Snx29Q9D3S3 Gm11996-201ENSMUST00000117538 915 ntBASIC12.54□□□□□ -0.4
Snx29Q9D3S3 Gm25545-201ENSMUST00000122673 323 ntBASIC12.54□□□□□ -0.4
Snx29Q9D3S3 Gm15620-201ENSMUST00000122949 270 ntBASIC12.54□□□□□ -0.4
Snx29Q9D3S3 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Snx29Q9D3S3 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC12.54□□□□□ -0.4
Snx29Q9D3S3 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Snx29Q9D3S3 Gm16167-201ENSMUST00000160428 1065 ntBASIC12.54□□□□□ -0.4
Snx29Q9D3S3 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Snx29Q9D3S3 Gm5529-201ENSMUST00000165691 891 ntBASIC12.54□□□□□ -0.4
Snx29Q9D3S3 Gm9372-201ENSMUST00000168454 430 ntBASIC12.54□□□□□ -0.4
Snx29Q9D3S3 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Snx29Q9D3S3 Gm23576-201ENSMUST00000179918 110 ntBASIC12.54□□□□□ -0.4
Snx29Q9D3S3 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC12.54□□□□□ -0.4
Snx29Q9D3S3 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC12.54□□□□□ -0.4
Snx29Q9D3S3 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC12.54□□□□□ -0.4
Snx29Q9D3S3 Gm9487-201ENSMUST00000216600 472 ntBASIC12.54□□□□□ -0.4
Snx29Q9D3S3 Gm11361-201ENSMUST00000223428 607 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Snx29Q9D3S3 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC12.54□□□□□ -0.4
Snx29Q9D3S3 AC102847.1-202ENSMUST00000226313 1245 ntBASIC12.54□□□□□ -0.4
Snx29Q9D3S3 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Snx29Q9D3S3 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Snx29Q9D3S3 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Snx29Q9D3S3 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Snx29Q9D3S3 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Snx29Q9D3S3 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Snx29Q9D3S3 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Snx29Q9D3S3 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Snx29Q9D3S3 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Snx29Q9D3S3 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Snx29Q9D3S3 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Snx29Q9D3S3 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC12.54□□□□□ -0.4
Snx29Q9D3S3 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Snx29Q9D3S3 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Snx29Q9D3S3 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.54□□□□□ -0.4
Snx29Q9D3S3 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Snx29Q9D3S3 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 94.8 ms