Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Gm11661-201ENSMUST00000121761 1327 ntBASIC11.86□□□□□ -0.51
Cdk5rap3Q99LM2 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cdk5rap3Q99LM2 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdk5rap3Q99LM2 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdk5rap3Q99LM2 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cdk5rap3Q99LM2 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC11.85□□□□□ -0.51
Cdk5rap3Q99LM2 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cdk5rap3Q99LM2 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Cdk5rap3Q99LM2 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC11.85□□□□□ -0.51
Cdk5rap3Q99LM2 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdk5rap3Q99LM2 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cdk5rap3Q99LM2 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdk5rap3Q99LM2 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdk5rap3Q99LM2 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC11.85□□□□□ -0.51
Cdk5rap3Q99LM2 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdk5rap3Q99LM2 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
Cdk5rap3Q99LM2 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdk5rap3Q99LM2 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cdk5rap3Q99LM2 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdk5rap3Q99LM2 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdk5rap3Q99LM2 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdk5rap3Q99LM2 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cdk5rap3Q99LM2 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Cdk5rap3Q99LM2 Gm12012-201ENSMUST00000118857 1066 ntBASIC11.85□□□□□ -0.51
Cdk5rap3Q99LM2 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cdk5rap3Q99LM2 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdk5rap3Q99LM2 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cdk5rap3Q99LM2 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cdk5rap3Q99LM2 Gm18038-201ENSMUST00000197900 485 ntBASIC11.85□□□□□ -0.51
Cdk5rap3Q99LM2 Gm43822-201ENSMUST00000200285 476 ntBASIC11.85□□□□□ -0.51
Cdk5rap3Q99LM2 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdk5rap3Q99LM2 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC11.85□□□□□ -0.51
Cdk5rap3Q99LM2 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdk5rap3Q99LM2 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Cdk5rap3Q99LM2 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdk5rap3Q99LM2 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdk5rap3Q99LM2 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cdk5rap3Q99LM2 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Cdk5rap3Q99LM2 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdk5rap3Q99LM2 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC11.85□□□□□ -0.51
Cdk5rap3Q99LM2 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdk5rap3Q99LM2 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdk5rap3Q99LM2 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdk5rap3Q99LM2 Gm44190-201ENSMUST00000205083 1401 ntBASIC11.85□□□□□ -0.51
Cdk5rap3Q99LM2 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Cdk5rap3Q99LM2 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdk5rap3Q99LM2 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdk5rap3Q99LM2 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdk5rap3Q99LM2 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC11.84□□□□□ -0.51
Cdk5rap3Q99LM2 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cdk5rap3Q99LM2 Gm9035-201ENSMUST00000218318 1697 ntBASIC11.84□□□□□ -0.51
Cdk5rap3Q99LM2 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cdk5rap3Q99LM2 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
Cdk5rap3Q99LM2 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdk5rap3Q99LM2 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdk5rap3Q99LM2 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cdk5rap3Q99LM2 Gm44663-201ENSMUST00000206898 3150 ntBASIC11.84□□□□□ -0.51
Cdk5rap3Q99LM2 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cdk5rap3Q99LM2 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdk5rap3Q99LM2 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdk5rap3Q99LM2 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdk5rap3Q99LM2 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdk5rap3Q99LM2 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdk5rap3Q99LM2 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdk5rap3Q99LM2 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdk5rap3Q99LM2 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdk5rap3Q99LM2 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Cdk5rap3Q99LM2 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC11.84□□□□□ -0.51
Cdk5rap3Q99LM2 Gm14723-201ENSMUST00000118686 215 ntBASIC11.84□□□□□ -0.51
Cdk5rap3Q99LM2 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC11.84□□□□□ -0.51
Cdk5rap3Q99LM2 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cdk5rap3Q99LM2 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC11.84□□□□□ -0.51
Cdk5rap3Q99LM2 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdk5rap3Q99LM2 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cdk5rap3Q99LM2 Gm20495-201ENSMUST00000173902 235 ntBASIC11.84□□□□□ -0.51
Cdk5rap3Q99LM2 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC11.84□□□□□ -0.51
Cdk5rap3Q99LM2 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC11.84□□□□□ -0.51
Cdk5rap3Q99LM2 Gm28071-201ENSMUST00000190355 478 ntBASIC11.84□□□□□ -0.51
Cdk5rap3Q99LM2 Gm37259-201ENSMUST00000193903 849 ntBASIC11.84□□□□□ -0.51
Cdk5rap3Q99LM2 Gm37666-201ENSMUST00000194110 866 ntBASIC11.84□□□□□ -0.51
Cdk5rap3Q99LM2 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdk5rap3Q99LM2 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC11.84□□□□□ -0.51
Cdk5rap3Q99LM2 Gm21027-201ENSMUST00000219300 1236 ntBASIC11.84□□□□□ -0.51
Cdk5rap3Q99LM2 CT009713.10-202ENSMUST00000225734 696 ntBASIC11.84□□□□□ -0.51
Cdk5rap3Q99LM2 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdk5rap3Q99LM2 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdk5rap3Q99LM2 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdk5rap3Q99LM2 Gm5537-201ENSMUST00000091117 1252 ntBASIC11.84□□□□□ -0.51
Cdk5rap3Q99LM2 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cdk5rap3Q99LM2 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Cdk5rap3Q99LM2 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cdk5rap3Q99LM2 Gm5846-201ENSMUST00000193146 1414 ntBASIC11.84□□□□□ -0.51
Cdk5rap3Q99LM2 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
Cdk5rap3Q99LM2 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Cdk5rap3Q99LM2 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdk5rap3Q99LM2 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cdk5rap3Q99LM2 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cdk5rap3Q99LM2 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cdk5rap3Q99LM2 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Cdk5rap3Q99LM2 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms