Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC14.1□□□□□ -0.15
RtcbQ99LF4 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RtcbQ99LF4 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RtcbQ99LF4 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RtcbQ99LF4 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RtcbQ99LF4 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
RtcbQ99LF4 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RtcbQ99LF4 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
RtcbQ99LF4 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RtcbQ99LF4 Gm43242-201ENSMUST00000199507 1776 ntBASIC14.1□□□□□ -0.15
RtcbQ99LF4 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RtcbQ99LF4 Gm12418-201ENSMUST00000118116 942 ntBASIC14.1□□□□□ -0.15
RtcbQ99LF4 Gm14113-201ENSMUST00000121399 976 ntBASIC14.1□□□□□ -0.15
RtcbQ99LF4 Gm5395-201ENSMUST00000121650 915 ntBASIC14.1□□□□□ -0.15
RtcbQ99LF4 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RtcbQ99LF4 Gm14232-201ENSMUST00000137176 446 ntTSL 3 BASIC14.1□□□□□ -0.15
RtcbQ99LF4 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RtcbQ99LF4 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC14.1□□□□□ -0.15
RtcbQ99LF4 Gm13827-201ENSMUST00000148801 372 ntBASIC14.1□□□□□ -0.15
RtcbQ99LF4 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RtcbQ99LF4 Mir133a-1hg-201ENSMUST00000179771 395 ntTSL 3 BASIC14.1□□□□□ -0.15
RtcbQ99LF4 Gm7627-201ENSMUST00000183205 999 ntBASIC14.1□□□□□ -0.15
RtcbQ99LF4 Gm43275-201ENSMUST00000202053 1020 ntBASIC14.1□□□□□ -0.15
RtcbQ99LF4 Gm7238-201ENSMUST00000206467 973 ntBASIC14.1□□□□□ -0.15
RtcbQ99LF4 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC14.1□□□□□ -0.15
RtcbQ99LF4 AC152169.1-201ENSMUST00000223901 701 ntBASIC14.1□□□□□ -0.15
RtcbQ99LF4 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RtcbQ99LF4 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
RtcbQ99LF4 Gm25007-201ENSMUST00000083808 133 ntBASIC14.1□□□□□ -0.15
RtcbQ99LF4 Gm44740-201ENSMUST00000205603 1614 ntBASIC14.1□□□□□ -0.15
RtcbQ99LF4 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RtcbQ99LF4 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RtcbQ99LF4 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RtcbQ99LF4 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
RtcbQ99LF4 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
RtcbQ99LF4 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
RtcbQ99LF4 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
RtcbQ99LF4 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
RtcbQ99LF4 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RtcbQ99LF4 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RtcbQ99LF4 Gm12912-201ENSMUST00000121596 1381 ntBASIC14.09□□□□□ -0.15
RtcbQ99LF4 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RtcbQ99LF4 Gm8050-201ENSMUST00000171987 1595 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
RtcbQ99LF4 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC14.09□□□□□ -0.15
RtcbQ99LF4 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RtcbQ99LF4 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC14.09□□□□□ -0.15
RtcbQ99LF4 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RtcbQ99LF4 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
RtcbQ99LF4 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RtcbQ99LF4 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RtcbQ99LF4 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RtcbQ99LF4 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC14.09□□□□□ -0.15
RtcbQ99LF4 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RtcbQ99LF4 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
RtcbQ99LF4 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RtcbQ99LF4 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RtcbQ99LF4 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
RtcbQ99LF4 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RtcbQ99LF4 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC14.09□□□□□ -0.15
RtcbQ99LF4 Gm23647-201ENSMUST00000175042 109 ntBASIC14.09□□□□□ -0.15
RtcbQ99LF4 Rn5s-201ENSMUST00000177555 119 ntBASIC14.09□□□□□ -0.15
RtcbQ99LF4 n-R5s108-201ENSMUST00000177575 119 ntBASIC14.09□□□□□ -0.15
RtcbQ99LF4 n-R5s121-201ENSMUST00000177589 119 ntBASIC14.09□□□□□ -0.15
RtcbQ99LF4 n-R5s146-201ENSMUST00000177889 119 ntBASIC14.09□□□□□ -0.15
RtcbQ99LF4 Gm22109-201ENSMUST00000177995 119 ntBASIC14.09□□□□□ -0.15
RtcbQ99LF4 Gm22291-201ENSMUST00000178027 119 ntBASIC14.09□□□□□ -0.15
RtcbQ99LF4 n-R5s141-201ENSMUST00000178066 119 ntBASIC14.09□□□□□ -0.15
RtcbQ99LF4 Gm23284-201ENSMUST00000178069 119 ntBASIC14.09□□□□□ -0.15
RtcbQ99LF4 n-R5s100-201ENSMUST00000178106 119 ntBASIC14.09□□□□□ -0.15
RtcbQ99LF4 n-R5s111-201ENSMUST00000178203 119 ntBASIC14.09□□□□□ -0.15
RtcbQ99LF4 n-R5s105-201ENSMUST00000178499 119 ntBASIC14.09□□□□□ -0.15
RtcbQ99LF4 n-R5s149-201ENSMUST00000178520 119 ntBASIC14.09□□□□□ -0.15
RtcbQ99LF4 n-R5s103-201ENSMUST00000178755 119 ntBASIC14.09□□□□□ -0.15
RtcbQ99LF4 n-R5s123-201ENSMUST00000178804 119 ntBASIC14.09□□□□□ -0.15
RtcbQ99LF4 n-R5s142-201ENSMUST00000178820 119 ntBASIC14.09□□□□□ -0.15
RtcbQ99LF4 n-R5s144-201ENSMUST00000178859 119 ntBASIC14.09□□□□□ -0.15
RtcbQ99LF4 n-R5s139-201ENSMUST00000178975 119 ntBASIC14.09□□□□□ -0.15
RtcbQ99LF4 n-R5s134-201ENSMUST00000178983 119 ntBASIC14.09□□□□□ -0.15
RtcbQ99LF4 n-R5s136-201ENSMUST00000179080 119 ntBASIC14.09□□□□□ -0.15
RtcbQ99LF4 Gm25018-201ENSMUST00000179081 119 ntBASIC14.09□□□□□ -0.15
RtcbQ99LF4 n-R5s104-201ENSMUST00000179107 119 ntBASIC14.09□□□□□ -0.15
RtcbQ99LF4 n-R5s113-201ENSMUST00000179143 119 ntBASIC14.09□□□□□ -0.15
RtcbQ99LF4 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
RtcbQ99LF4 n-R5s133-201ENSMUST00000179275 119 ntBASIC14.09□□□□□ -0.15
RtcbQ99LF4 n-R5s117-201ENSMUST00000179431 119 ntBASIC14.09□□□□□ -0.15
RtcbQ99LF4 Gm25212-201ENSMUST00000179432 119 ntBASIC14.09□□□□□ -0.15
RtcbQ99LF4 n-R5s138-201ENSMUST00000179476 119 ntBASIC14.09□□□□□ -0.15
RtcbQ99LF4 n-R5s122-201ENSMUST00000179500 119 ntBASIC14.09□□□□□ -0.15
RtcbQ99LF4 n-R5s143-201ENSMUST00000179542 119 ntBASIC14.09□□□□□ -0.15
RtcbQ99LF4 n-R5s107-201ENSMUST00000179704 119 ntBASIC14.09□□□□□ -0.15
RtcbQ99LF4 Gm26391-201ENSMUST00000179843 119 ntBASIC14.09□□□□□ -0.15
RtcbQ99LF4 n-R5s110-201ENSMUST00000179995 119 ntBASIC14.09□□□□□ -0.15
RtcbQ99LF4 n-R5s128-201ENSMUST00000180096 119 ntBASIC14.09□□□□□ -0.15
RtcbQ99LF4 n-R5s124-201ENSMUST00000180334 119 ntBASIC14.09□□□□□ -0.15
RtcbQ99LF4 Gm7985-201ENSMUST00000183329 981 ntBASIC14.09□□□□□ -0.15
RtcbQ99LF4 Gm27440-201ENSMUST00000184785 107 ntBASIC14.09□□□□□ -0.15
RtcbQ99LF4 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC14.09□□□□□ -0.15
RtcbQ99LF4 Gm29642-201ENSMUST00000186170 921 ntTSL 2 BASIC14.09□□□□□ -0.15
RtcbQ99LF4 Gm18558-201ENSMUST00000186253 1214 ntBASIC14.09□□□□□ -0.15
RtcbQ99LF4 Cdk5-203ENSMUST00000198990 783 ntTSL 5 BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 86.7 ms