Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Usp11Q99K46 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC12.06□□□□□ -0.48
Usp11Q99K46 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Usp11Q99K46 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Usp11Q99K46 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Usp11Q99K46 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Usp11Q99K46 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Usp11Q99K46 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Usp11Q99K46 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Usp11Q99K46 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Usp11Q99K46 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Usp11Q99K46 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Usp11Q99K46 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC12.06□□□□□ -0.48
Usp11Q99K46 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC12.06□□□□□ -0.48
Usp11Q99K46 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC12.06□□□□□ -0.48
Usp11Q99K46 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Usp11Q99K46 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Usp11Q99K46 Gm12857-201ENSMUST00000117678 592 ntBASIC12.06□□□□□ -0.48
Usp11Q99K46 Gm12196-201ENSMUST00000120954 262 ntBASIC12.06□□□□□ -0.48
Usp11Q99K46 Cd63-ps-202ENSMUST00000154992 717 ntBASIC12.06□□□□□ -0.48
Usp11Q99K46 Gm16570-201ENSMUST00000161951 436 ntBASIC12.06□□□□□ -0.48
Usp11Q99K46 H2-Q3-201ENSMUST00000172583 608 ntBASIC12.06□□□□□ -0.48
Usp11Q99K46 Gm25732-201ENSMUST00000175168 60 ntBASIC12.06□□□□□ -0.48
Usp11Q99K46 Gm9034-201ENSMUST00000182071 1005 ntBASIC12.06□□□□□ -0.48
Usp11Q99K46 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Usp11Q99K46 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Usp11Q99K46 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Usp11Q99K46 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Usp11Q99K46 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC12.06□□□□□ -0.48
Usp11Q99K46 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Usp11Q99K46 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC12.06□□□□□ -0.48
Usp11Q99K46 AC133602.1-201ENSMUST00000227510 509 ntBASIC12.06□□□□□ -0.48
Usp11Q99K46 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Usp11Q99K46 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Usp11Q99K46 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC12.06□□□□□ -0.48
Usp11Q99K46 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Usp11Q99K46 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Usp11Q99K46 Gm37931-201ENSMUST00000194686 2866 ntBASIC12.06□□□□□ -0.48
Usp11Q99K46 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Usp11Q99K46 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC12.06□□□□□ -0.48
Usp11Q99K46 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Usp11Q99K46 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Usp11Q99K46 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Usp11Q99K46 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Usp11Q99K46 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Usp11Q99K46 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Usp11Q99K46 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Usp11Q99K46 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Usp11Q99K46 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Usp11Q99K46 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Usp11Q99K46 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Usp11Q99K46 Gm43963-201ENSMUST00000203466 2488 ntBASIC12.05□□□□□ -0.48
Usp11Q99K46 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
Usp11Q99K46 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Usp11Q99K46 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Usp11Q99K46 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Usp11Q99K46 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Usp11Q99K46 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Usp11Q99K46 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Usp11Q99K46 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Usp11Q99K46 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC12.05□□□□□ -0.48
Usp11Q99K46 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC12.05□□□□□ -0.48
Usp11Q99K46 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Usp11Q99K46 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Usp11Q99K46 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Usp11Q99K46 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC12.05□□□□□ -0.48
Usp11Q99K46 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Usp11Q99K46 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC12.05□□□□□ -0.48
Usp11Q99K46 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Usp11Q99K46 Gm25881-201ENSMUST00000157783 103 ntBASIC12.05□□□□□ -0.48
Usp11Q99K46 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Usp11Q99K46 Gm9445-201ENSMUST00000207454 1285 ntBASIC12.05□□□□□ -0.48
Usp11Q99K46 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Usp11Q99K46 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Usp11Q99K46 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Usp11Q99K46 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Usp11Q99K46 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Usp11Q99K46 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Usp11Q99K46 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Usp11Q99K46 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Usp11Q99K46 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Usp11Q99K46 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Usp11Q99K46 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Usp11Q99K46 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Usp11Q99K46 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Usp11Q99K46 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Usp11Q99K46 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Usp11Q99K46 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Usp11Q99K46 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Usp11Q99K46 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Usp11Q99K46 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Usp11Q99K46 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Usp11Q99K46 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC12.04□□□□□ -0.48
Usp11Q99K46 Gm37600-201ENSMUST00000193764 3292 ntBASIC12.04□□□□□ -0.48
Usp11Q99K46 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Usp11Q99K46 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC12.04□□□□□ -0.48
Usp11Q99K46 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC12.04□□□□□ -0.48
Usp11Q99K46 Gm15515-201ENSMUST00000117827 822 ntBASIC12.04□□□□□ -0.48
Usp11Q99K46 Gm14441-201ENSMUST00000121960 540 ntBASIC12.04□□□□□ -0.48
Usp11Q99K46 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms