Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhb6Q91XZ4 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Pcdhb6Q91XZ4 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Pcdhb6Q91XZ4 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Pcdhb6Q91XZ4 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhb6Q91XZ4 Gm12419-201ENSMUST00000116649 636 ntBASIC11.74□□□□□ -0.53
Pcdhb6Q91XZ4 Gm12165-201ENSMUST00000117047 342 ntBASIC11.74□□□□□ -0.53
Pcdhb6Q91XZ4 Gm15352-201ENSMUST00000118696 270 ntBASIC11.74□□□□□ -0.53
Pcdhb6Q91XZ4 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC11.74□□□□□ -0.53
Pcdhb6Q91XZ4 Gm22846-201ENSMUST00000157706 270 ntBASIC11.74□□□□□ -0.53
Pcdhb6Q91XZ4 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhb6Q91XZ4 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhb6Q91XZ4 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhb6Q91XZ4 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhb6Q91XZ4 Gm7183-201ENSMUST00000213870 1005 ntBASIC11.74□□□□□ -0.53
Pcdhb6Q91XZ4 Gm7395-201ENSMUST00000216059 1045 ntBASIC11.74□□□□□ -0.53
Pcdhb6Q91XZ4 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC11.74□□□□□ -0.53
Pcdhb6Q91XZ4 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhb6Q91XZ4 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhb6Q91XZ4 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Pcdhb6Q91XZ4 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhb6Q91XZ4 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhb6Q91XZ4 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhb6Q91XZ4 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhb6Q91XZ4 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhb6Q91XZ4 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhb6Q91XZ4 Gm21939-201ENSMUST00000221137 2773 ntBASIC11.74□□□□□ -0.53
Pcdhb6Q91XZ4 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Pcdhb6Q91XZ4 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Pcdhb6Q91XZ4 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhb6Q91XZ4 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Pcdhb6Q91XZ4 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhb6Q91XZ4 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhb6Q91XZ4 Rgr-203ENSMUST00000225070 4704 ntBASIC11.74□□□□□ -0.53
Pcdhb6Q91XZ4 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhb6Q91XZ4 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
Pcdhb6Q91XZ4 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Pcdhb6Q91XZ4 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhb6Q91XZ4 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhb6Q91XZ4 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb6Q91XZ4 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb6Q91XZ4 Gm44663-201ENSMUST00000206898 3150 ntBASIC11.73□□□□□ -0.53
Pcdhb6Q91XZ4 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Pcdhb6Q91XZ4 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb6Q91XZ4 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb6Q91XZ4 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb6Q91XZ4 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb6Q91XZ4 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb6Q91XZ4 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb6Q91XZ4 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb6Q91XZ4 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb6Q91XZ4 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
Pcdhb6Q91XZ4 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.73□□□□□ -0.53
Pcdhb6Q91XZ4 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Pcdhb6Q91XZ4 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Pcdhb6Q91XZ4 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC11.73□□□□□ -0.53
Pcdhb6Q91XZ4 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC11.73□□□□□ -0.53
Pcdhb6Q91XZ4 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb6Q91XZ4 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Pcdhb6Q91XZ4 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb6Q91XZ4 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Pcdhb6Q91XZ4 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb6Q91XZ4 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Pcdhb6Q91XZ4 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC11.73□□□□□ -0.53
Pcdhb6Q91XZ4 Gm7741-201ENSMUST00000181445 989 ntBASIC11.73□□□□□ -0.53
Pcdhb6Q91XZ4 Gm19353-201ENSMUST00000184561 445 ntBASIC11.73□□□□□ -0.53
Pcdhb6Q91XZ4 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC11.73□□□□□ -0.53
Pcdhb6Q91XZ4 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC11.73□□□□□ -0.53
Pcdhb6Q91XZ4 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC11.73□□□□□ -0.53
Pcdhb6Q91XZ4 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb6Q91XZ4 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb6Q91XZ4 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC11.73□□□□□ -0.53
Pcdhb6Q91XZ4 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC11.73□□□□□ -0.53
Pcdhb6Q91XZ4 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb6Q91XZ4 Gm6831-202ENSMUST00000213025 1673 ntBASIC11.73□□□□□ -0.53
Pcdhb6Q91XZ4 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb6Q91XZ4 CT009546.1-201ENSMUST00000222573 1120 ntBASIC11.73□□□□□ -0.53
Pcdhb6Q91XZ4 AC154290.1-201ENSMUST00000223786 1240 ntBASIC11.73□□□□□ -0.53
Pcdhb6Q91XZ4 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb6Q91XZ4 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb6Q91XZ4 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb6Q91XZ4 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb6Q91XZ4 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb6Q91XZ4 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.73□□□□□ -0.53
Pcdhb6Q91XZ4 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb6Q91XZ4 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb6Q91XZ4 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb6Q91XZ4 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb6Q91XZ4 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb6Q91XZ4 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC11.73□□□□□ -0.53
Pcdhb6Q91XZ4 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb6Q91XZ4 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb6Q91XZ4 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb6Q91XZ4 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb6Q91XZ4 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC11.72□□□□□ -0.53
Pcdhb6Q91XZ4 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Pcdhb6Q91XZ4 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
Pcdhb6Q91XZ4 Gm45206-201ENSMUST00000206885 2285 ntBASIC11.72□□□□□ -0.53
Pcdhb6Q91XZ4 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb6Q91XZ4 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms