Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
H1fooQ8VIK3 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC9.59□□□□□ -0.87
H1fooQ8VIK3 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
H1fooQ8VIK3 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
H1fooQ8VIK3 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
H1fooQ8VIK3 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
H1fooQ8VIK3 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
H1fooQ8VIK3 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
H1fooQ8VIK3 Gm21939-201ENSMUST00000221137 2773 ntBASIC9.58□□□□□ -0.88
H1fooQ8VIK3 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
H1fooQ8VIK3 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
H1fooQ8VIK3 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC9.58□□□□□ -0.88
H1fooQ8VIK3 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
H1fooQ8VIK3 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
H1fooQ8VIK3 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
H1fooQ8VIK3 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
H1fooQ8VIK3 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC9.58□□□□□ -0.88
H1fooQ8VIK3 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
H1fooQ8VIK3 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
H1fooQ8VIK3 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
H1fooQ8VIK3 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
H1fooQ8VIK3 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
H1fooQ8VIK3 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
H1fooQ8VIK3 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
H1fooQ8VIK3 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
H1fooQ8VIK3 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
H1fooQ8VIK3 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
H1fooQ8VIK3 Gm14724-201ENSMUST00000118400 537 ntBASIC9.58□□□□□ -0.88
H1fooQ8VIK3 Gm12501-201ENSMUST00000119163 529 ntBASIC9.58□□□□□ -0.88
H1fooQ8VIK3 Gm14208-201ENSMUST00000119645 678 ntBASIC9.58□□□□□ -0.88
H1fooQ8VIK3 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC9.58□□□□□ -0.88
H1fooQ8VIK3 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
H1fooQ8VIK3 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
H1fooQ8VIK3 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
H1fooQ8VIK3 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC9.58□□□□□ -0.88
H1fooQ8VIK3 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC9.58□□□□□ -0.88
H1fooQ8VIK3 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC9.58□□□□□ -0.88
H1fooQ8VIK3 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
H1fooQ8VIK3 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC9.58□□□□□ -0.88
H1fooQ8VIK3 Gm8100-201ENSMUST00000182906 988 ntBASIC9.58□□□□□ -0.88
H1fooQ8VIK3 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC9.58□□□□□ -0.88
H1fooQ8VIK3 Gm27530-201ENSMUST00000184096 98 ntBASIC9.58□□□□□ -0.88
H1fooQ8VIK3 Gm38151-201ENSMUST00000195085 289 ntBASIC9.58□□□□□ -0.88
H1fooQ8VIK3 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
H1fooQ8VIK3 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
H1fooQ8VIK3 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
H1fooQ8VIK3 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
H1fooQ8VIK3 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
H1fooQ8VIK3 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
H1fooQ8VIK3 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
H1fooQ8VIK3 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
H1fooQ8VIK3 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
H1fooQ8VIK3 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
H1fooQ8VIK3 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
H1fooQ8VIK3 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
H1fooQ8VIK3 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
H1fooQ8VIK3 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
H1fooQ8VIK3 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
H1fooQ8VIK3 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
H1fooQ8VIK3 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC9.58□□□□□ -0.88
H1fooQ8VIK3 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
H1fooQ8VIK3 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
H1fooQ8VIK3 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
H1fooQ8VIK3 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
H1fooQ8VIK3 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
H1fooQ8VIK3 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
H1fooQ8VIK3 Gm44573-201ENSMUST00000191753 2370 ntBASIC9.58□□□□□ -0.88
H1fooQ8VIK3 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
H1fooQ8VIK3 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC9.58□□□□□ -0.88
H1fooQ8VIK3 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
H1fooQ8VIK3 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
H1fooQ8VIK3 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
H1fooQ8VIK3 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
H1fooQ8VIK3 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
H1fooQ8VIK3 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
H1fooQ8VIK3 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
H1fooQ8VIK3 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
H1fooQ8VIK3 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
H1fooQ8VIK3 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
H1fooQ8VIK3 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC9.57□□□□□ -0.88
H1fooQ8VIK3 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
H1fooQ8VIK3 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
H1fooQ8VIK3 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
H1fooQ8VIK3 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
H1fooQ8VIK3 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
H1fooQ8VIK3 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
H1fooQ8VIK3 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC9.57□□□□□ -0.88
H1fooQ8VIK3 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
H1fooQ8VIK3 Gm43127-201ENSMUST00000195890 2789 ntBASIC9.57□□□□□ -0.88
H1fooQ8VIK3 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC9.57□□□□□ -0.88
H1fooQ8VIK3 Gm14017-201ENSMUST00000121934 386 ntBASIC9.57□□□□□ -0.88
H1fooQ8VIK3 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
H1fooQ8VIK3 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
H1fooQ8VIK3 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC9.57□□□□□ -0.88
H1fooQ8VIK3 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
H1fooQ8VIK3 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
H1fooQ8VIK3 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC9.57□□□□□ -0.88
H1fooQ8VIK3 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC9.57□□□□□ -0.88
H1fooQ8VIK3 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC9.57□□□□□ -0.88
H1fooQ8VIK3 Gm19324-201ENSMUST00000213229 1169 ntBASIC9.57□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 102.4 ms