Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Chmp7Q8R1T1 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp7Q8R1T1 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp7Q8R1T1 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp7Q8R1T1 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp7Q8R1T1 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp7Q8R1T1 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp7Q8R1T1 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp7Q8R1T1 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp7Q8R1T1 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp7Q8R1T1 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC14.61□□□□□ -0.07
Chmp7Q8R1T1 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp7Q8R1T1 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp7Q8R1T1 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC14.61□□□□□ -0.07
Chmp7Q8R1T1 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC14.61□□□□□ -0.07
Chmp7Q8R1T1 Gm22846-201ENSMUST00000157706 270 ntBASIC14.61□□□□□ -0.07
Chmp7Q8R1T1 Gm4982-201ENSMUST00000160440 1098 ntBASIC14.61□□□□□ -0.07
Chmp7Q8R1T1 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Chmp7Q8R1T1 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Chmp7Q8R1T1 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC14.61□□□□□ -0.07
Chmp7Q8R1T1 Gm43778-201ENSMUST00000199438 199 ntBASIC14.61□□□□□ -0.07
Chmp7Q8R1T1 Gm18204-201ENSMUST00000209835 793 ntBASIC14.61□□□□□ -0.07
Chmp7Q8R1T1 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp7Q8R1T1 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC14.61□□□□□ -0.07
Chmp7Q8R1T1 Gm7525-201ENSMUST00000219425 454 ntBASIC14.61□□□□□ -0.07
Chmp7Q8R1T1 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Chmp7Q8R1T1 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp7Q8R1T1 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp7Q8R1T1 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp7Q8R1T1 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
Chmp7Q8R1T1 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp7Q8R1T1 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp7Q8R1T1 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp7Q8R1T1 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Chmp7Q8R1T1 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp7Q8R1T1 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chmp7Q8R1T1 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp7Q8R1T1 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp7Q8R1T1 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Chmp7Q8R1T1 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp7Q8R1T1 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp7Q8R1T1 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp7Q8R1T1 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp7Q8R1T1 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp7Q8R1T1 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp7Q8R1T1 Gm10728-201ENSMUST00000194292 1829 ntBASIC14.6□□□□□ -0.07
Chmp7Q8R1T1 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp7Q8R1T1 Gm12663-201ENSMUST00000118481 958 ntBASIC14.6□□□□□ -0.07
Chmp7Q8R1T1 Gm15617-201ENSMUST00000118973 771 ntBASIC14.6□□□□□ -0.07
Chmp7Q8R1T1 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC14.6□□□□□ -0.07
Chmp7Q8R1T1 Gm14213-201ENSMUST00000119778 768 ntBASIC14.6□□□□□ -0.07
Chmp7Q8R1T1 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Chmp7Q8R1T1 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Chmp7Q8R1T1 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp7Q8R1T1 Gm7719-201ENSMUST00000182374 975 ntBASIC14.6□□□□□ -0.07
Chmp7Q8R1T1 Gm42660-201ENSMUST00000197733 947 ntBASIC14.6□□□□□ -0.07
Chmp7Q8R1T1 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp7Q8R1T1 AC126799.1-201ENSMUST00000221976 246 ntBASIC14.6□□□□□ -0.07
Chmp7Q8R1T1 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp7Q8R1T1 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Chmp7Q8R1T1 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Chmp7Q8R1T1 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp7Q8R1T1 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC14.6□□□□□ -0.07
Chmp7Q8R1T1 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp7Q8R1T1 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp7Q8R1T1 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp7Q8R1T1 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp7Q8R1T1 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Chmp7Q8R1T1 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC14.6□□□□□ -0.07
Chmp7Q8R1T1 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Chmp7Q8R1T1 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp7Q8R1T1 Gm5308-201ENSMUST00000196752 1354 ntBASIC14.6□□□□□ -0.07
Chmp7Q8R1T1 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chmp7Q8R1T1 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chmp7Q8R1T1 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chmp7Q8R1T1 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Chmp7Q8R1T1 Gm10305-201ENSMUST00000195331 2475 ntBASIC14.59□□□□□ -0.07
Chmp7Q8R1T1 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chmp7Q8R1T1 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC14.59□□□□□ -0.07
Chmp7Q8R1T1 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chmp7Q8R1T1 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chmp7Q8R1T1 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chmp7Q8R1T1 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chmp7Q8R1T1 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC14.59□□□□□ -0.07
Chmp7Q8R1T1 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Chmp7Q8R1T1 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC14.59□□□□□ -0.07
Chmp7Q8R1T1 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
Chmp7Q8R1T1 Gm11619-201ENSMUST00000117474 237 ntBASIC14.59□□□□□ -0.07
Chmp7Q8R1T1 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC14.59□□□□□ -0.07
Chmp7Q8R1T1 Gm17214-201ENSMUST00000164501 541 ntBASIC14.59□□□□□ -0.07
Chmp7Q8R1T1 Gm26976-201ENSMUST00000182929 908 ntBASIC14.59□□□□□ -0.07
Chmp7Q8R1T1 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Chmp7Q8R1T1 Gm43966-201ENSMUST00000203301 612 ntBASIC14.59□□□□□ -0.07
Chmp7Q8R1T1 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC14.59□□□□□ -0.07
Chmp7Q8R1T1 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC14.59□□□□□ -0.07
Chmp7Q8R1T1 AC122024.3-201ENSMUST00000217719 294 ntBASIC14.59□□□□□ -0.07
Chmp7Q8R1T1 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chmp7Q8R1T1 Gm8255-201ENSMUST00000218693 305 ntBASIC14.59□□□□□ -0.07
Chmp7Q8R1T1 Gm26670-202ENSMUST00000226862 340 ntBASIC14.59□□□□□ -0.07
Chmp7Q8R1T1 Gm8181-201ENSMUST00000062242 669 ntBASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms