Protein–RNA interactions for Protein: Q8CE47

Slc49a3, Solute carrier family 49 member A3, mousemouse

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc49a3Q8CE47 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Slc49a3Q8CE47 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Slc49a3Q8CE47 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Slc49a3Q8CE47 2010111I01Rik-201ENSMUST00000021911 2979 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Slc49a3Q8CE47 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Slc49a3Q8CE47 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Slc49a3Q8CE47 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Slc49a3Q8CE47 March10-201ENSMUST00000049995 3074 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Slc49a3Q8CE47 Gm13694-201ENSMUST00000178533 2493 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Slc49a3Q8CE47 Gm13693-201ENSMUST00000178960 2493 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Slc49a3Q8CE47 Gm13698-202ENSMUST00000179192 2493 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Slc49a3Q8CE47 Gm13696-202ENSMUST00000180347 2493 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Slc49a3Q8CE47 Nln-205ENSMUST00000224945 2486 ntBASIC10.47□□□□□ -0.73
Slc49a3Q8CE47 Gm13691-201ENSMUST00000099947 2493 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Slc49a3Q8CE47 Gm13697-201ENSMUST00000099948 2493 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Slc49a3Q8CE47 Gm13695-201ENSMUST00000099951 2493 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Slc49a3Q8CE47 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Slc49a3Q8CE47 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Slc49a3Q8CE47 Gm26684-202ENSMUST00000228229 8257 ntBASIC10.47□□□□□ -0.73
Slc49a3Q8CE47 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Slc49a3Q8CE47 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Slc49a3Q8CE47 Gm11989-201ENSMUST00000117240 672 ntBASIC10.47□□□□□ -0.73
Slc49a3Q8CE47 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Slc49a3Q8CE47 Gm14071-201ENSMUST00000117817 509 ntBASIC10.47□□□□□ -0.73
Slc49a3Q8CE47 Gm11362-201ENSMUST00000118838 850 ntBASIC10.47□□□□□ -0.73
Slc49a3Q8CE47 Gm15004-201ENSMUST00000119192 630 ntBASIC10.47□□□□□ -0.73
Slc49a3Q8CE47 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC10.47□□□□□ -0.73
Slc49a3Q8CE47 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Slc49a3Q8CE47 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Slc49a3Q8CE47 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Slc49a3Q8CE47 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Slc49a3Q8CE47 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC10.47□□□□□ -0.73
Slc49a3Q8CE47 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC10.47□□□□□ -0.73
Slc49a3Q8CE47 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Slc49a3Q8CE47 Gm34767-201ENSMUST00000191813 1062 ntBASIC10.47□□□□□ -0.73
Slc49a3Q8CE47 Gm38319-201ENSMUST00000194537 1266 ntBASIC10.47□□□□□ -0.73
Slc49a3Q8CE47 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC10.47□□□□□ -0.73
Slc49a3Q8CE47 Gm9728-201ENSMUST00000200197 1055 ntBASIC10.47□□□□□ -0.73
Slc49a3Q8CE47 Gm9299-201ENSMUST00000206392 1140 ntBASIC10.47□□□□□ -0.73
Slc49a3Q8CE47 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC10.47□□□□□ -0.73
Slc49a3Q8CE47 Gm5950-201ENSMUST00000213337 772 ntBASIC10.47□□□□□ -0.73
Slc49a3Q8CE47 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC10.47□□□□□ -0.73
Slc49a3Q8CE47 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Slc49a3Q8CE47 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Slc49a3Q8CE47 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Slc49a3Q8CE47 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC10.47□□□□□ -0.73
Slc49a3Q8CE47 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Slc49a3Q8CE47 Lao1-201ENSMUST00000058651 2349 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Slc49a3Q8CE47 Tmem154-201ENSMUST00000107682 3342 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Slc49a3Q8CE47 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Slc49a3Q8CE47 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Slc49a3Q8CE47 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC10.47□□□□□ -0.73
Slc49a3Q8CE47 Cln3-204ENSMUST00000116269 2487 ntAPPRIS P2 TSL 5 BASIC10.47□□□□□ -0.73
Slc49a3Q8CE47 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC10.47□□□□□ -0.73
Slc49a3Q8CE47 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Slc49a3Q8CE47 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Slc49a3Q8CE47 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Slc49a3Q8CE47 C130013H08Rik-201ENSMUST00000197569 3692 ntBASIC10.47□□□□□ -0.73
Slc49a3Q8CE47 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Slc49a3Q8CE47 Hmgb2-201ENSMUST00000067925 2628 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Slc49a3Q8CE47 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Slc49a3Q8CE47 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Slc49a3Q8CE47 Ppp4r1l-ps-202ENSMUST00000132669 2767 ntBASIC10.47□□□□□ -0.73
Slc49a3Q8CE47 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Slc49a3Q8CE47 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Slc49a3Q8CE47 AC154528.2-201ENSMUST00000228432 3023 ntBASIC10.47□□□□□ -0.73
Slc49a3Q8CE47 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Slc49a3Q8CE47 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Slc49a3Q8CE47 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Slc49a3Q8CE47 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Slc49a3Q8CE47 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Slc49a3Q8CE47 Olfr315-202ENSMUST00000203256 2458 ntAPPRIS P1 TSL 3 BASIC10.46□□□□□ -0.73
Slc49a3Q8CE47 Gm10827-201ENSMUST00000181897 2586 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Slc49a3Q8CE47 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Slc49a3Q8CE47 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Slc49a3Q8CE47 Hdac9-206ENSMUST00000209990 3072 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Slc49a3Q8CE47 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Slc49a3Q8CE47 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Slc49a3Q8CE47 Gm25214-201ENSMUST00000104573 129 ntBASIC10.46□□□□□ -0.73
Slc49a3Q8CE47 Gm14660-201ENSMUST00000119809 575 ntBASIC10.46□□□□□ -0.73
Slc49a3Q8CE47 Gm12129-201ENSMUST00000120104 1147 ntBASIC10.46□□□□□ -0.73
Slc49a3Q8CE47 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC10.46□□□□□ -0.73
Slc49a3Q8CE47 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Slc49a3Q8CE47 Gm17420-201ENSMUST00000164753 153 ntBASIC10.46□□□□□ -0.73
Slc49a3Q8CE47 Gm27731-201ENSMUST00000185192 107 ntBASIC10.46□□□□□ -0.73
Slc49a3Q8CE47 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC10.46□□□□□ -0.73
Slc49a3Q8CE47 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC10.46□□□□□ -0.73
Slc49a3Q8CE47 AC153954.1-201ENSMUST00000216959 255 ntBASIC10.46□□□□□ -0.73
Slc49a3Q8CE47 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Slc49a3Q8CE47 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC10.46□□□□□ -0.73
Slc49a3Q8CE47 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Slc49a3Q8CE47 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Slc49a3Q8CE47 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC10.46□□□□□ -0.74
Slc49a3Q8CE47 Gm13920-201ENSMUST00000146134 1663 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Slc49a3Q8CE47 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC10.46□□□□□ -0.74
Slc49a3Q8CE47 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Slc49a3Q8CE47 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Slc49a3Q8CE47 Rasgef1a-203ENSMUST00000203804 2183 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Slc49a3Q8CE47 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Slc49a3Q8CE47 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms