Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Gm28646-201ENSMUST00000188220 697 ntBASIC12.15□□□□□ -0.46
Ccdc87Q8CDL9 Gm28205-201ENSMUST00000189177 697 ntBASIC12.15□□□□□ -0.46
Ccdc87Q8CDL9 Gm29032-201ENSMUST00000189797 697 ntBASIC12.15□□□□□ -0.46
Ccdc87Q8CDL9 Gm28695-201ENSMUST00000190300 697 ntBASIC12.15□□□□□ -0.46
Ccdc87Q8CDL9 Gm37448-201ENSMUST00000192795 697 ntBASIC12.15□□□□□ -0.46
Ccdc87Q8CDL9 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC12.15□□□□□ -0.46
Ccdc87Q8CDL9 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Ccdc87Q8CDL9 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Ccdc87Q8CDL9 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC12.15□□□□□ -0.46
Ccdc87Q8CDL9 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc87Q8CDL9 AC153380.1-201ENSMUST00000214959 2364 ntBASIC12.15□□□□□ -0.46
Ccdc87Q8CDL9 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc87Q8CDL9 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc87Q8CDL9 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc87Q8CDL9 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc87Q8CDL9 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Ccdc87Q8CDL9 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc87Q8CDL9 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc87Q8CDL9 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC12.15□□□□□ -0.46
Ccdc87Q8CDL9 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Ccdc87Q8CDL9 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
Ccdc87Q8CDL9 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Ccdc87Q8CDL9 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC12.15□□□□□ -0.47
Ccdc87Q8CDL9 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Ccdc87Q8CDL9 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc87Q8CDL9 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc87Q8CDL9 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc87Q8CDL9 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc87Q8CDL9 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc87Q8CDL9 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc87Q8CDL9 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC12.14□□□□□ -0.47
Ccdc87Q8CDL9 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc87Q8CDL9 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc87Q8CDL9 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc87Q8CDL9 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Ccdc87Q8CDL9 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Ccdc87Q8CDL9 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc87Q8CDL9 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc87Q8CDL9 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Ccdc87Q8CDL9 Gm11500-201ENSMUST00000118237 601 ntBASIC12.14□□□□□ -0.47
Ccdc87Q8CDL9 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.14□□□□□ -0.47
Ccdc87Q8CDL9 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Ccdc87Q8CDL9 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC12.14□□□□□ -0.47
Ccdc87Q8CDL9 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc87Q8CDL9 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.14□□□□□ -0.47
Ccdc87Q8CDL9 Gm38114-201ENSMUST00000191877 1232 ntBASIC12.14□□□□□ -0.47
Ccdc87Q8CDL9 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.14□□□□□ -0.47
Ccdc87Q8CDL9 Mettl6-204ENSMUST00000227595 1027 ntBASIC12.14□□□□□ -0.47
Ccdc87Q8CDL9 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc87Q8CDL9 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc87Q8CDL9 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc87Q8CDL9 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc87Q8CDL9 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc87Q8CDL9 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc87Q8CDL9 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Ccdc87Q8CDL9 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc87Q8CDL9 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc87Q8CDL9 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc87Q8CDL9 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc87Q8CDL9 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Ccdc87Q8CDL9 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc87Q8CDL9 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc87Q8CDL9 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc87Q8CDL9 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Ccdc87Q8CDL9 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Ccdc87Q8CDL9 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc87Q8CDL9 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc87Q8CDL9 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc87Q8CDL9 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc87Q8CDL9 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC12.14□□□□□ -0.47
Ccdc87Q8CDL9 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc87Q8CDL9 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc87Q8CDL9 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc87Q8CDL9 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc87Q8CDL9 Gm42141-201ENSMUST00000196534 2172 ntBASIC12.13□□□□□ -0.47
Ccdc87Q8CDL9 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Ccdc87Q8CDL9 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc87Q8CDL9 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc87Q8CDL9 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc87Q8CDL9 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Ccdc87Q8CDL9 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc87Q8CDL9 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc87Q8CDL9 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Ccdc87Q8CDL9 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc87Q8CDL9 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC12.13□□□□□ -0.47
Ccdc87Q8CDL9 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Ccdc87Q8CDL9 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC12.13□□□□□ -0.47
Ccdc87Q8CDL9 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC12.13□□□□□ -0.47
Ccdc87Q8CDL9 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc87Q8CDL9 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Ccdc87Q8CDL9 Gm24749-201ENSMUST00000157838 343 ntBASIC12.13□□□□□ -0.47
Ccdc87Q8CDL9 Mir5132-201ENSMUST00000175166 71 ntBASIC12.13□□□□□ -0.47
Ccdc87Q8CDL9 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Ccdc87Q8CDL9 Gm16505-201ENSMUST00000179981 232 ntBASIC12.13□□□□□ -0.47
Ccdc87Q8CDL9 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC12.13□□□□□ -0.47
Ccdc87Q8CDL9 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC12.13□□□□□ -0.47
Ccdc87Q8CDL9 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc87Q8CDL9 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc87Q8CDL9 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc87Q8CDL9 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms