Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Trub1Q8C0D0 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trub1Q8C0D0 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.78□□□□□ -0.52
Trub1Q8C0D0 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trub1Q8C0D0 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Trub1Q8C0D0 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trub1Q8C0D0 Gm15617-201ENSMUST00000118973 771 ntBASIC11.78□□□□□ -0.52
Trub1Q8C0D0 Gm12129-201ENSMUST00000120104 1147 ntBASIC11.78□□□□□ -0.52
Trub1Q8C0D0 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC11.78□□□□□ -0.52
Trub1Q8C0D0 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trub1Q8C0D0 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC11.78□□□□□ -0.52
Trub1Q8C0D0 Gm10774-201ENSMUST00000188689 204 ntBASIC11.78□□□□□ -0.52
Trub1Q8C0D0 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC11.78□□□□□ -0.52
Trub1Q8C0D0 Gm4959-201ENSMUST00000197271 1044 ntBASIC11.78□□□□□ -0.52
Trub1Q8C0D0 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trub1Q8C0D0 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trub1Q8C0D0 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trub1Q8C0D0 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trub1Q8C0D0 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trub1Q8C0D0 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trub1Q8C0D0 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trub1Q8C0D0 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Trub1Q8C0D0 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
Trub1Q8C0D0 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trub1Q8C0D0 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trub1Q8C0D0 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC11.78□□□□□ -0.52
Trub1Q8C0D0 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trub1Q8C0D0 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trub1Q8C0D0 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trub1Q8C0D0 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Trub1Q8C0D0 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trub1Q8C0D0 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trub1Q8C0D0 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trub1Q8C0D0 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trub1Q8C0D0 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Trub1Q8C0D0 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC11.77□□□□□ -0.52
Trub1Q8C0D0 Gm5171-201ENSMUST00000214944 1415 ntBASIC11.77□□□□□ -0.52
Trub1Q8C0D0 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC11.77□□□□□ -0.52
Trub1Q8C0D0 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trub1Q8C0D0 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trub1Q8C0D0 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Trub1Q8C0D0 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Trub1Q8C0D0 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Trub1Q8C0D0 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trub1Q8C0D0 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC11.77□□□□□ -0.52
Trub1Q8C0D0 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC11.77□□□□□ -0.52
Trub1Q8C0D0 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trub1Q8C0D0 n-R5s64-201ENSMUST00000102019 119 ntBASIC11.77□□□□□ -0.53
Trub1Q8C0D0 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Trub1Q8C0D0 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trub1Q8C0D0 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trub1Q8C0D0 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC11.77□□□□□ -0.53
Trub1Q8C0D0 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trub1Q8C0D0 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trub1Q8C0D0 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC11.77□□□□□ -0.53
Trub1Q8C0D0 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trub1Q8C0D0 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC11.77□□□□□ -0.53
Trub1Q8C0D0 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC11.77□□□□□ -0.53
Trub1Q8C0D0 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trub1Q8C0D0 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC11.77□□□□□ -0.53
Trub1Q8C0D0 Gm2517-201ENSMUST00000215651 348 ntBASIC11.77□□□□□ -0.53
Trub1Q8C0D0 Gm7395-201ENSMUST00000216059 1045 ntBASIC11.77□□□□□ -0.53
Trub1Q8C0D0 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trub1Q8C0D0 Olfr584-201ENSMUST00000098210 964 ntBASIC11.77□□□□□ -0.53
Trub1Q8C0D0 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Trub1Q8C0D0 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trub1Q8C0D0 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trub1Q8C0D0 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.53
Trub1Q8C0D0 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trub1Q8C0D0 Gm36987-201ENSMUST00000194704 2979 ntBASIC11.77□□□□□ -0.53
Trub1Q8C0D0 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trub1Q8C0D0 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trub1Q8C0D0 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trub1Q8C0D0 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC11.77□□□□□ -0.53
Trub1Q8C0D0 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trub1Q8C0D0 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trub1Q8C0D0 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trub1Q8C0D0 Gm36940-201ENSMUST00000194281 2036 ntBASIC11.77□□□□□ -0.53
Trub1Q8C0D0 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trub1Q8C0D0 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trub1Q8C0D0 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Trub1Q8C0D0 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
Trub1Q8C0D0 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trub1Q8C0D0 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trub1Q8C0D0 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trub1Q8C0D0 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Trub1Q8C0D0 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trub1Q8C0D0 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trub1Q8C0D0 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trub1Q8C0D0 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trub1Q8C0D0 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trub1Q8C0D0 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trub1Q8C0D0 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trub1Q8C0D0 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trub1Q8C0D0 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC11.76□□□□□ -0.53
Trub1Q8C0D0 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trub1Q8C0D0 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC11.76□□□□□ -0.53
Trub1Q8C0D0 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC11.76□□□□□ -0.53
Trub1Q8C0D0 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trub1Q8C0D0 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms