Protein–RNA interactions for Protein: Q78RX3

Smim12, Small integral membrane protein 12, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim12Q78RX3 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smim12Q78RX3 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smim12Q78RX3 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC9.64□□□□□ -0.87
Smim12Q78RX3 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Smim12Q78RX3 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Smim12Q78RX3 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smim12Q78RX3 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smim12Q78RX3 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smim12Q78RX3 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Smim12Q78RX3 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Smim12Q78RX3 Gm28635-201ENSMUST00000189772 4734 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Smim12Q78RX3 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC9.64□□□□□ -0.87
Smim12Q78RX3 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Smim12Q78RX3 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smim12Q78RX3 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smim12Q78RX3 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smim12Q78RX3 Gm11783-201ENSMUST00000119549 885 ntBASIC9.64□□□□□ -0.87
Smim12Q78RX3 Gm11573-201ENSMUST00000119956 394 ntBASIC9.64□□□□□ -0.87
Smim12Q78RX3 Gm13665-201ENSMUST00000120830 528 ntBASIC9.64□□□□□ -0.87
Smim12Q78RX3 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smim12Q78RX3 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Smim12Q78RX3 Gm17420-201ENSMUST00000164753 153 ntBASIC9.64□□□□□ -0.87
Smim12Q78RX3 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Smim12Q78RX3 Gm5342-201ENSMUST00000181982 1003 ntBASIC9.64□□□□□ -0.87
Smim12Q78RX3 Gm27501-201ENSMUST00000183599 107 ntBASIC9.64□□□□□ -0.87
Smim12Q78RX3 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Smim12Q78RX3 AY702102-202ENSMUST00000194651 1173 ntBASIC9.64□□□□□ -0.87
Smim12Q78RX3 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC9.64□□□□□ -0.87
Smim12Q78RX3 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC9.64□□□□□ -0.87
Smim12Q78RX3 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Smim12Q78RX3 AC113082.1-201ENSMUST00000217324 327 ntBASIC9.64□□□□□ -0.87
Smim12Q78RX3 Gm9797-202ENSMUST00000218003 294 ntBASIC9.64□□□□□ -0.87
Smim12Q78RX3 AC122891.1-201ENSMUST00000218671 268 ntBASIC9.64□□□□□ -0.87
Smim12Q78RX3 Gm18615-201ENSMUST00000222919 1031 ntBASIC9.64□□□□□ -0.87
Smim12Q78RX3 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smim12Q78RX3 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Smim12Q78RX3 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC9.64□□□□□ -0.87
Smim12Q78RX3 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Smim12Q78RX3 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Smim12Q78RX3 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Smim12Q78RX3 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smim12Q78RX3 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC9.64□□□□□ -0.87
Smim12Q78RX3 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Smim12Q78RX3 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Smim12Q78RX3 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC9.64□□□□□ -0.87
Smim12Q78RX3 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC9.64□□□□□ -0.87
Smim12Q78RX3 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Smim12Q78RX3 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Smim12Q78RX3 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Smim12Q78RX3 Gm43014-201ENSMUST00000198568 2443 ntBASIC9.64□□□□□ -0.87
Smim12Q78RX3 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smim12Q78RX3 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smim12Q78RX3 Zmynd8-221ENSMUST00000177633 5093 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smim12Q78RX3 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smim12Q78RX3 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smim12Q78RX3 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smim12Q78RX3 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smim12Q78RX3 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Smim12Q78RX3 Thsd7a-206ENSMUST00000172356 10998 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Smim12Q78RX3 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Smim12Q78RX3 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smim12Q78RX3 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smim12Q78RX3 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Smim12Q78RX3 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smim12Q78RX3 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smim12Q78RX3 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Smim12Q78RX3 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC9.63□□□□□ -0.87
Smim12Q78RX3 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smim12Q78RX3 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smim12Q78RX3 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smim12Q78RX3 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Smim12Q78RX3 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smim12Q78RX3 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Smim12Q78RX3 Gm13437-201ENSMUST00000122434 1981 ntBASIC9.63□□□□□ -0.87
Smim12Q78RX3 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smim12Q78RX3 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smim12Q78RX3 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Smim12Q78RX3 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smim12Q78RX3 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smim12Q78RX3 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smim12Q78RX3 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Smim12Q78RX3 Gm18798-201ENSMUST00000187264 1700 ntBASIC9.63□□□□□ -0.87
Smim12Q78RX3 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC9.63□□□□□ -0.87
Smim12Q78RX3 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smim12Q78RX3 Myh11-201ENSMUST00000090287 6632 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smim12Q78RX3 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC9.63□□□□□ -0.87
Smim12Q78RX3 Gm7150-201ENSMUST00000122032 981 ntBASIC9.63□□□□□ -0.87
Smim12Q78RX3 Gm15276-201ENSMUST00000145953 498 ntBASIC9.63□□□□□ -0.87
Smim12Q78RX3 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC9.63□□□□□ -0.87
Smim12Q78RX3 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smim12Q78RX3 Gm8815-201ENSMUST00000173809 620 ntBASIC9.63□□□□□ -0.87
Smim12Q78RX3 Gm27572-201ENSMUST00000183702 255 ntBASIC9.63□□□□□ -0.87
Smim12Q78RX3 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC9.63□□□□□ -0.87
Smim12Q78RX3 Gm5852-201ENSMUST00000194119 1021 ntBASIC9.63□□□□□ -0.87
Smim12Q78RX3 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC9.63□□□□□ -0.87
Smim12Q78RX3 AC166349.1-201ENSMUST00000220866 695 ntBASIC9.63□□□□□ -0.87
Smim12Q78RX3 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smim12Q78RX3 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Smim12Q78RX3 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Smim12Q78RX3 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC9.63□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms