Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nup98Q6PFD9 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup98Q6PFD9 C130083M11Rik-201ENSMUST00000197171 2072 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nup98Q6PFD9 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup98Q6PFD9 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup98Q6PFD9 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup98Q6PFD9 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nup98Q6PFD9 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nup98Q6PFD9 Gm42970-201ENSMUST00000196407 1352 ntBASIC13.25□□□□□ -0.29
Nup98Q6PFD9 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nup98Q6PFD9 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nup98Q6PFD9 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nup98Q6PFD9 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.25□□□□□ -0.29
Nup98Q6PFD9 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nup98Q6PFD9 Gm13326-201ENSMUST00000118730 1011 ntBASIC13.25□□□□□ -0.29
Nup98Q6PFD9 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC13.25□□□□□ -0.29
Nup98Q6PFD9 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC13.25□□□□□ -0.29
Nup98Q6PFD9 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC13.25□□□□□ -0.29
Nup98Q6PFD9 Gm23647-201ENSMUST00000175042 109 ntBASIC13.25□□□□□ -0.29
Nup98Q6PFD9 Rn5s-201ENSMUST00000177555 119 ntBASIC13.25□□□□□ -0.29
Nup98Q6PFD9 n-R5s108-201ENSMUST00000177575 119 ntBASIC13.25□□□□□ -0.29
Nup98Q6PFD9 n-R5s121-201ENSMUST00000177589 119 ntBASIC13.25□□□□□ -0.29
Nup98Q6PFD9 n-R5s146-201ENSMUST00000177889 119 ntBASIC13.25□□□□□ -0.29
Nup98Q6PFD9 Gm22109-201ENSMUST00000177995 119 ntBASIC13.25□□□□□ -0.29
Nup98Q6PFD9 Gm22291-201ENSMUST00000178027 119 ntBASIC13.25□□□□□ -0.29
Nup98Q6PFD9 n-R5s141-201ENSMUST00000178066 119 ntBASIC13.25□□□□□ -0.29
Nup98Q6PFD9 Gm23284-201ENSMUST00000178069 119 ntBASIC13.25□□□□□ -0.29
Nup98Q6PFD9 n-R5s100-201ENSMUST00000178106 119 ntBASIC13.25□□□□□ -0.29
Nup98Q6PFD9 n-R5s111-201ENSMUST00000178203 119 ntBASIC13.25□□□□□ -0.29
Nup98Q6PFD9 n-R5s105-201ENSMUST00000178499 119 ntBASIC13.25□□□□□ -0.29
Nup98Q6PFD9 n-R5s149-201ENSMUST00000178520 119 ntBASIC13.25□□□□□ -0.29
Nup98Q6PFD9 n-R5s103-201ENSMUST00000178755 119 ntBASIC13.25□□□□□ -0.29
Nup98Q6PFD9 n-R5s123-201ENSMUST00000178804 119 ntBASIC13.25□□□□□ -0.29
Nup98Q6PFD9 n-R5s142-201ENSMUST00000178820 119 ntBASIC13.25□□□□□ -0.29
Nup98Q6PFD9 n-R5s144-201ENSMUST00000178859 119 ntBASIC13.25□□□□□ -0.29
Nup98Q6PFD9 n-R5s139-201ENSMUST00000178975 119 ntBASIC13.25□□□□□ -0.29
Nup98Q6PFD9 n-R5s134-201ENSMUST00000178983 119 ntBASIC13.25□□□□□ -0.29
Nup98Q6PFD9 n-R5s136-201ENSMUST00000179080 119 ntBASIC13.25□□□□□ -0.29
Nup98Q6PFD9 Gm25018-201ENSMUST00000179081 119 ntBASIC13.25□□□□□ -0.29
Nup98Q6PFD9 n-R5s104-201ENSMUST00000179107 119 ntBASIC13.25□□□□□ -0.29
Nup98Q6PFD9 n-R5s113-201ENSMUST00000179143 119 ntBASIC13.25□□□□□ -0.29
Nup98Q6PFD9 n-R5s133-201ENSMUST00000179275 119 ntBASIC13.25□□□□□ -0.29
Nup98Q6PFD9 n-R5s117-201ENSMUST00000179431 119 ntBASIC13.25□□□□□ -0.29
Nup98Q6PFD9 Gm25212-201ENSMUST00000179432 119 ntBASIC13.25□□□□□ -0.29
Nup98Q6PFD9 n-R5s138-201ENSMUST00000179476 119 ntBASIC13.25□□□□□ -0.29
Nup98Q6PFD9 n-R5s122-201ENSMUST00000179500 119 ntBASIC13.25□□□□□ -0.29
Nup98Q6PFD9 n-R5s143-201ENSMUST00000179542 119 ntBASIC13.25□□□□□ -0.29
Nup98Q6PFD9 n-R5s107-201ENSMUST00000179704 119 ntBASIC13.25□□□□□ -0.29
Nup98Q6PFD9 Gm26391-201ENSMUST00000179843 119 ntBASIC13.25□□□□□ -0.29
Nup98Q6PFD9 n-R5s110-201ENSMUST00000179995 119 ntBASIC13.25□□□□□ -0.29
Nup98Q6PFD9 n-R5s128-201ENSMUST00000180096 119 ntBASIC13.25□□□□□ -0.29
Nup98Q6PFD9 n-R5s124-201ENSMUST00000180334 119 ntBASIC13.25□□□□□ -0.29
Nup98Q6PFD9 Gm28032-201ENSMUST00000184104 96 ntBASIC13.25□□□□□ -0.29
Nup98Q6PFD9 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC13.25□□□□□ -0.29
Nup98Q6PFD9 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nup98Q6PFD9 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nup98Q6PFD9 Tbc1d24-211ENSMUST00000201583 893 ntTSL 5 BASIC13.25□□□□□ -0.29
Nup98Q6PFD9 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nup98Q6PFD9 Gm24089-201ENSMUST00000093696 109 ntBASIC13.25□□□□□ -0.29
Nup98Q6PFD9 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nup98Q6PFD9 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nup98Q6PFD9 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13.25□□□□□ -0.29
Nup98Q6PFD9 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nup98Q6PFD9 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nup98Q6PFD9 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nup98Q6PFD9 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC13.25□□□□□ -0.29
Nup98Q6PFD9 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nup98Q6PFD9 Gm15519-201ENSMUST00000120088 1566 ntBASIC13.25□□□□□ -0.29
Nup98Q6PFD9 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nup98Q6PFD9 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nup98Q6PFD9 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nup98Q6PFD9 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nup98Q6PFD9 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Nup98Q6PFD9 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Nup98Q6PFD9 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nup98Q6PFD9 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nup98Q6PFD9 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nup98Q6PFD9 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nup98Q6PFD9 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nup98Q6PFD9 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nup98Q6PFD9 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nup98Q6PFD9 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nup98Q6PFD9 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Nup98Q6PFD9 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Nup98Q6PFD9 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nup98Q6PFD9 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nup98Q6PFD9 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nup98Q6PFD9 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC13.25□□□□□ -0.29
Nup98Q6PFD9 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nup98Q6PFD9 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC13.25□□□□□ -0.29
Nup98Q6PFD9 9530085P06Rik-201ENSMUST00000182121 827 ntBASIC13.25□□□□□ -0.29
Nup98Q6PFD9 Mrgprb7-ps-201ENSMUST00000190238 964 ntBASIC13.25□□□□□ -0.29
Nup98Q6PFD9 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nup98Q6PFD9 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nup98Q6PFD9 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nup98Q6PFD9 AC142266.1-201ENSMUST00000228107 415 ntBASIC13.25□□□□□ -0.29
Nup98Q6PFD9 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Nup98Q6PFD9 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nup98Q6PFD9 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nup98Q6PFD9 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms