Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Snrnp40Q6PE01 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Snrnp40Q6PE01 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Snrnp40Q6PE01 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC10.08□□□□□ -0.8
Snrnp40Q6PE01 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Snrnp40Q6PE01 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Snrnp40Q6PE01 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Snrnp40Q6PE01 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Snrnp40Q6PE01 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Snrnp40Q6PE01 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Snrnp40Q6PE01 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Snrnp40Q6PE01 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Snrnp40Q6PE01 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Snrnp40Q6PE01 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Snrnp40Q6PE01 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Snrnp40Q6PE01 Gm25148-201ENSMUST00000104611 123 ntBASIC10.08□□□□□ -0.8
Snrnp40Q6PE01 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC10.08□□□□□ -0.8
Snrnp40Q6PE01 Gm13284-201ENSMUST00000121020 547 ntBASIC10.08□□□□□ -0.8
Snrnp40Q6PE01 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC10.08□□□□□ -0.8
Snrnp40Q6PE01 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC10.08□□□□□ -0.8
Snrnp40Q6PE01 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC10.08□□□□□ -0.8
Snrnp40Q6PE01 Gm24328-201ENSMUST00000175104 67 ntBASIC10.08□□□□□ -0.8
Snrnp40Q6PE01 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC10.08□□□□□ -0.8
Snrnp40Q6PE01 Gm37782-201ENSMUST00000194879 678 ntBASIC10.08□□□□□ -0.8
Snrnp40Q6PE01 Gm43547-201ENSMUST00000197729 328 ntBASIC10.08□□□□□ -0.8
Snrnp40Q6PE01 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC10.08□□□□□ -0.8
Snrnp40Q6PE01 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC10.08□□□□□ -0.8
Snrnp40Q6PE01 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC10.08□□□□□ -0.8
Snrnp40Q6PE01 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC10.08□□□□□ -0.8
Snrnp40Q6PE01 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC10.08□□□□□ -0.8
Snrnp40Q6PE01 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC10.08□□□□□ -0.8
Snrnp40Q6PE01 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC10.08□□□□□ -0.8
Snrnp40Q6PE01 AC102847.1-202ENSMUST00000226313 1245 ntBASIC10.08□□□□□ -0.8
Snrnp40Q6PE01 AC115304.2-201ENSMUST00000226399 332 ntBASIC10.08□□□□□ -0.8
Snrnp40Q6PE01 Atp5j2-201ENSMUST00000037056 540 ntTSL 5 BASIC10.08□□□□□ -0.8
Snrnp40Q6PE01 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Snrnp40Q6PE01 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Snrnp40Q6PE01 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Snrnp40Q6PE01 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Snrnp40Q6PE01 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Snrnp40Q6PE01 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Snrnp40Q6PE01 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Snrnp40Q6PE01 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC10.08□□□□□ -0.8
Snrnp40Q6PE01 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Snrnp40Q6PE01 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Snrnp40Q6PE01 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Snrnp40Q6PE01 Gm7224-201ENSMUST00000121359 2066 ntBASIC10.08□□□□□ -0.8
Snrnp40Q6PE01 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC10.08□□□□□ -0.8
Snrnp40Q6PE01 Rnf17-202ENSMUST00000223627 2077 ntBASIC10.08□□□□□ -0.8
Snrnp40Q6PE01 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC10.08□□□□□ -0.8
Snrnp40Q6PE01 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Snrnp40Q6PE01 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Snrnp40Q6PE01 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Snrnp40Q6PE01 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Snrnp40Q6PE01 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Snrnp40Q6PE01 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Snrnp40Q6PE01 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Snrnp40Q6PE01 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Snrnp40Q6PE01 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Snrnp40Q6PE01 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Snrnp40Q6PE01 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Snrnp40Q6PE01 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Snrnp40Q6PE01 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Snrnp40Q6PE01 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Snrnp40Q6PE01 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Snrnp40Q6PE01 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Snrnp40Q6PE01 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Snrnp40Q6PE01 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Snrnp40Q6PE01 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Snrnp40Q6PE01 Gm19692-201ENSMUST00000203856 2084 ntBASIC10.07□□□□□ -0.8
Snrnp40Q6PE01 Gm44241-201ENSMUST00000203230 1662 ntBASIC10.07□□□□□ -0.8
Snrnp40Q6PE01 Gm5053-201ENSMUST00000208361 1678 ntBASIC10.07□□□□□ -0.8
Snrnp40Q6PE01 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Snrnp40Q6PE01 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Snrnp40Q6PE01 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Snrnp40Q6PE01 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Snrnp40Q6PE01 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Snrnp40Q6PE01 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Snrnp40Q6PE01 Gm22937-201ENSMUST00000103954 131 ntBASIC10.07□□□□□ -0.8
Snrnp40Q6PE01 Gm9133-201ENSMUST00000118289 540 ntBASIC10.07□□□□□ -0.8
Snrnp40Q6PE01 Gm25343-201ENSMUST00000157460 107 ntBASIC10.07□□□□□ -0.8
Snrnp40Q6PE01 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC10.07□□□□□ -0.8
Snrnp40Q6PE01 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Snrnp40Q6PE01 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC10.07□□□□□ -0.8
Snrnp40Q6PE01 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Snrnp40Q6PE01 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC10.07□□□□□ -0.8
Snrnp40Q6PE01 Gm42599-201ENSMUST00000201308 469 ntBASIC10.07□□□□□ -0.8
Snrnp40Q6PE01 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Snrnp40Q6PE01 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Snrnp40Q6PE01 Id2-203ENSMUST00000222667 958 ntBASIC10.07□□□□□ -0.8
Snrnp40Q6PE01 CT010480.2-201ENSMUST00000225424 737 ntBASIC10.07□□□□□ -0.8
Snrnp40Q6PE01 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Snrnp40Q6PE01 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Snrnp40Q6PE01 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Snrnp40Q6PE01 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Snrnp40Q6PE01 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Snrnp40Q6PE01 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Snrnp40Q6PE01 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Snrnp40Q6PE01 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Snrnp40Q6PE01 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms