Protein–RNA interactions for Protein: Q60778

Nfkbib, NF-kappa-B inhibitor beta, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NfkbibQ60778 Gm43152-201ENSMUST00000202495 1638 ntBASIC13.72□□□□□ -0.21
NfkbibQ60778 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NfkbibQ60778 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NfkbibQ60778 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NfkbibQ60778 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
NfkbibQ60778 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
NfkbibQ60778 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NfkbibQ60778 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NfkbibQ60778 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
NfkbibQ60778 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
NfkbibQ60778 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC13.71□□□□□ -0.21
NfkbibQ60778 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
NfkbibQ60778 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC13.71□□□□□ -0.21
NfkbibQ60778 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
NfkbibQ60778 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC13.71□□□□□ -0.21
NfkbibQ60778 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NfkbibQ60778 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC13.71□□□□□ -0.21
NfkbibQ60778 Mir6407-201ENSMUST00000184510 101 ntBASIC13.71□□□□□ -0.21
NfkbibQ60778 Gm43371-201ENSMUST00000202838 1031 ntBASIC13.71□□□□□ -0.21
NfkbibQ60778 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC13.71□□□□□ -0.21
NfkbibQ60778 AC122024.3-201ENSMUST00000217719 294 ntBASIC13.71□□□□□ -0.21
NfkbibQ60778 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC13.71□□□□□ -0.21
NfkbibQ60778 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NfkbibQ60778 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NfkbibQ60778 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
NfkbibQ60778 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC13.71□□□□□ -0.21
NfkbibQ60778 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
NfkbibQ60778 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
NfkbibQ60778 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
NfkbibQ60778 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NfkbibQ60778 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
NfkbibQ60778 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
NfkbibQ60778 Gm43984-201ENSMUST00000204572 2864 ntBASIC13.71□□□□□ -0.22
NfkbibQ60778 AC155245.1-201ENSMUST00000222266 1804 ntBASIC13.71□□□□□ -0.22
NfkbibQ60778 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
NfkbibQ60778 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
NfkbibQ60778 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
NfkbibQ60778 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
NfkbibQ60778 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
NfkbibQ60778 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.22
NfkbibQ60778 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
NfkbibQ60778 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
NfkbibQ60778 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
NfkbibQ60778 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
NfkbibQ60778 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NfkbibQ60778 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
NfkbibQ60778 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
NfkbibQ60778 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
NfkbibQ60778 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NfkbibQ60778 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
NfkbibQ60778 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NfkbibQ60778 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
NfkbibQ60778 Gm12129-201ENSMUST00000120104 1147 ntBASIC13.7□□□□□ -0.22
NfkbibQ60778 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC13.7□□□□□ -0.22
NfkbibQ60778 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NfkbibQ60778 Gm22442-201ENSMUST00000157256 144 ntBASIC13.7□□□□□ -0.22
NfkbibQ60778 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
NfkbibQ60778 Gm4895-201ENSMUST00000181646 1137 ntBASIC13.7□□□□□ -0.22
NfkbibQ60778 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC13.7□□□□□ -0.22
NfkbibQ60778 Gm4811-201ENSMUST00000220879 1220 ntBASIC13.7□□□□□ -0.22
NfkbibQ60778 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NfkbibQ60778 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NfkbibQ60778 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
NfkbibQ60778 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NfkbibQ60778 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
NfkbibQ60778 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NfkbibQ60778 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
NfkbibQ60778 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NfkbibQ60778 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
NfkbibQ60778 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NfkbibQ60778 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NfkbibQ60778 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NfkbibQ60778 Gm44663-201ENSMUST00000206898 3150 ntBASIC13.7□□□□□ -0.22
NfkbibQ60778 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC13.7□□□□□ -0.22
NfkbibQ60778 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
NfkbibQ60778 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
NfkbibQ60778 AC109214.1-201ENSMUST00000219520 1372 ntBASIC13.7□□□□□ -0.22
NfkbibQ60778 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NfkbibQ60778 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NfkbibQ60778 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC13.7□□□□□ -0.22
NfkbibQ60778 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NfkbibQ60778 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NfkbibQ60778 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
NfkbibQ60778 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NfkbibQ60778 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
NfkbibQ60778 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NfkbibQ60778 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NfkbibQ60778 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NfkbibQ60778 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
NfkbibQ60778 Gm43931-201ENSMUST00000204817 2870 ntBASIC13.69□□□□□ -0.22
NfkbibQ60778 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
NfkbibQ60778 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC13.69□□□□□ -0.22
NfkbibQ60778 Gm13117-201ENSMUST00000120894 691 ntBASIC13.69□□□□□ -0.22
NfkbibQ60778 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC13.69□□□□□ -0.22
NfkbibQ60778 Gm13284-201ENSMUST00000121020 547 ntBASIC13.69□□□□□ -0.22
NfkbibQ60778 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NfkbibQ60778 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC13.69□□□□□ -0.22
NfkbibQ60778 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC13.69□□□□□ -0.22
NfkbibQ60778 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NfkbibQ60778 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms