Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfaip3Q60769 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfaip3Q60769 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC10.82□□□□□ -0.68
Tnfaip3Q60769 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Tnfaip3Q60769 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfaip3Q60769 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Tnfaip3Q60769 Gm12247-201ENSMUST00000117585 670 ntBASIC10.82□□□□□ -0.68
Tnfaip3Q60769 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfaip3Q60769 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfaip3Q60769 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC10.82□□□□□ -0.68
Tnfaip3Q60769 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC10.82□□□□□ -0.68
Tnfaip3Q60769 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfaip3Q60769 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC10.82□□□□□ -0.68
Tnfaip3Q60769 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Tnfaip3Q60769 Gm7741-201ENSMUST00000181445 989 ntBASIC10.82□□□□□ -0.68
Tnfaip3Q60769 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC10.82□□□□□ -0.68
Tnfaip3Q60769 Gm8574-201ENSMUST00000203207 924 ntBASIC10.82□□□□□ -0.68
Tnfaip3Q60769 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfaip3Q60769 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC10.82□□□□□ -0.68
Tnfaip3Q60769 AC129219.2-201ENSMUST00000224324 701 ntBASIC10.82□□□□□ -0.68
Tnfaip3Q60769 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfaip3Q60769 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfaip3Q60769 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfaip3Q60769 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Tnfaip3Q60769 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Tnfaip3Q60769 Olfr584-201ENSMUST00000098210 964 ntBASIC10.82□□□□□ -0.68
Tnfaip3Q60769 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfaip3Q60769 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfaip3Q60769 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfaip3Q60769 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC10.82□□□□□ -0.68
Tnfaip3Q60769 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Tnfaip3Q60769 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfaip3Q60769 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfaip3Q60769 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfaip3Q60769 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Tnfaip3Q60769 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfaip3Q60769 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfaip3Q60769 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfaip3Q60769 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfaip3Q60769 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC10.82□□□□□ -0.68
Tnfaip3Q60769 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfaip3Q60769 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfaip3Q60769 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfaip3Q60769 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfaip3Q60769 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfaip3Q60769 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfaip3Q60769 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfaip3Q60769 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfaip3Q60769 Gm45677-201ENSMUST00000209975 1341 ntBASIC10.82□□□□□ -0.68
Tnfaip3Q60769 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Tnfaip3Q60769 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfaip3Q60769 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfaip3Q60769 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfaip3Q60769 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC10.81□□□□□ -0.68
Tnfaip3Q60769 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Tnfaip3Q60769 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfaip3Q60769 Gm38194-201ENSMUST00000194529 2211 ntBASIC10.81□□□□□ -0.68
Tnfaip3Q60769 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfaip3Q60769 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Tnfaip3Q60769 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfaip3Q60769 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC10.81□□□□□ -0.68
Tnfaip3Q60769 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfaip3Q60769 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfaip3Q60769 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfaip3Q60769 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfaip3Q60769 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfaip3Q60769 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC10.81□□□□□ -0.68
Tnfaip3Q60769 AC166836.1-201ENSMUST00000219933 1795 ntBASIC10.81□□□□□ -0.68
Tnfaip3Q60769 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfaip3Q60769 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfaip3Q60769 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC10.81□□□□□ -0.68
Tnfaip3Q60769 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC10.81□□□□□ -0.68
Tnfaip3Q60769 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC10.81□□□□□ -0.68
Tnfaip3Q60769 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Tnfaip3Q60769 Gm11244-201ENSMUST00000121243 237 ntBASIC10.81□□□□□ -0.68
Tnfaip3Q60769 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC10.81□□□□□ -0.68
Tnfaip3Q60769 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfaip3Q60769 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfaip3Q60769 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfaip3Q60769 Gm3551-201ENSMUST00000190750 664 ntBASIC10.81□□□□□ -0.68
Tnfaip3Q60769 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC10.81□□□□□ -0.68
Tnfaip3Q60769 Gm9645-201ENSMUST00000197131 792 ntBASIC10.81□□□□□ -0.68
Tnfaip3Q60769 Gm44126-201ENSMUST00000204831 514 ntBASIC10.81□□□□□ -0.68
Tnfaip3Q60769 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfaip3Q60769 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfaip3Q60769 AC153505.1-201ENSMUST00000218819 1071 ntBASIC10.81□□□□□ -0.68
Tnfaip3Q60769 CT009546.1-201ENSMUST00000222573 1120 ntBASIC10.81□□□□□ -0.68
Tnfaip3Q60769 AC154257.1-202ENSMUST00000224729 843 ntBASIC10.81□□□□□ -0.68
Tnfaip3Q60769 AC159103.1-201ENSMUST00000228325 429 ntBASIC10.81□□□□□ -0.68
Tnfaip3Q60769 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfaip3Q60769 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfaip3Q60769 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Tnfaip3Q60769 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfaip3Q60769 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfaip3Q60769 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfaip3Q60769 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfaip3Q60769 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Tnfaip3Q60769 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfaip3Q60769 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfaip3Q60769 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms