Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nr1h4Q60641 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nr1h4Q60641 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Nr1h4Q60641 Vwa5b1-201ENSMUST00000030533 7486 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nr1h4Q60641 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Nr1h4Q60641 Chst15-202ENSMUST00000080215 4813 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nr1h4Q60641 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nr1h4Q60641 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nr1h4Q60641 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nr1h4Q60641 Kif4-201ENSMUST00000048962 4983 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nr1h4Q60641 Dchs1-201ENSMUST00000078482 10754 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Nr1h4Q60641 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nr1h4Q60641 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nr1h4Q60641 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nr1h4Q60641 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nr1h4Q60641 Timm10b-203ENSMUST00000106783 3273 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nr1h4Q60641 H2-Ob-201ENSMUST00000095342 2671 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nr1h4Q60641 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Nr1h4Q60641 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nr1h4Q60641 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Nr1h4Q60641 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nr1h4Q60641 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Nr1h4Q60641 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nr1h4Q60641 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC10.91□□□□□ -0.66
Nr1h4Q60641 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Nr1h4Q60641 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Nr1h4Q60641 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nr1h4Q60641 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nr1h4Q60641 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC10.91□□□□□ -0.66
Nr1h4Q60641 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Nr1h4Q60641 AC123619.2-202ENSMUST00000225097 1568 ntBASIC10.91□□□□□ -0.66
Nr1h4Q60641 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC10.91□□□□□ -0.66
Nr1h4Q60641 Gm5403-201ENSMUST00000117105 2795 ntBASIC10.91□□□□□ -0.66
Nr1h4Q60641 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
Nr1h4Q60641 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Nr1h4Q60641 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nr1h4Q60641 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Nr1h4Q60641 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Nr1h4Q60641 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Nr1h4Q60641 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nr1h4Q60641 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
Nr1h4Q60641 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC10.91□□□□□ -0.66
Nr1h4Q60641 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC10.91□□□□□ -0.66
Nr1h4Q60641 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC10.91□□□□□ -0.66
Nr1h4Q60641 Gm26047-201ENSMUST00000157308 113 ntBASIC10.91□□□□□ -0.66
Nr1h4Q60641 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Nr1h4Q60641 Gm27046-201ENSMUST00000182160 463 ntBASIC10.91□□□□□ -0.66
Nr1h4Q60641 Gm29164-201ENSMUST00000185454 1024 ntBASIC10.91□□□□□ -0.66
Nr1h4Q60641 Gm5982-201ENSMUST00000196234 512 ntBASIC10.91□□□□□ -0.66
Nr1h4Q60641 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Nr1h4Q60641 Gm26047-202ENSMUST00000198840 115 ntBASIC10.91□□□□□ -0.66
Nr1h4Q60641 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC10.91□□□□□ -0.66
Nr1h4Q60641 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC10.91□□□□□ -0.66
Nr1h4Q60641 AC134869.4-202ENSMUST00000224350 837 ntBASIC10.91□□□□□ -0.66
Nr1h4Q60641 Gzmn-202ENSMUST00000225535 989 ntBASIC10.91□□□□□ -0.66
Nr1h4Q60641 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nr1h4Q60641 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nr1h4Q60641 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
Nr1h4Q60641 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nr1h4Q60641 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nr1h4Q60641 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
Nr1h4Q60641 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nr1h4Q60641 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nr1h4Q60641 Gm32742-201ENSMUST00000210433 8516 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Nr1h4Q60641 Erich3-203ENSMUST00000189969 3460 ntBASIC10.91□□□□□ -0.66
Nr1h4Q60641 Gm43127-201ENSMUST00000195890 2789 ntBASIC10.91□□□□□ -0.66
Nr1h4Q60641 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nr1h4Q60641 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Nr1h4Q60641 Srp54a-207ENSMUST00000110708 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nr1h4Q60641 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nr1h4Q60641 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC10.91□□□□□ -0.66
Nr1h4Q60641 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Nr1h4Q60641 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Nr1h4Q60641 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nr1h4Q60641 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nr1h4Q60641 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nr1h4Q60641 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nr1h4Q60641 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC10.9□□□□□ -0.66
Nr1h4Q60641 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nr1h4Q60641 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nr1h4Q60641 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nr1h4Q60641 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nr1h4Q60641 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nr1h4Q60641 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nr1h4Q60641 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nr1h4Q60641 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nr1h4Q60641 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Nr1h4Q60641 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Nr1h4Q60641 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Nr1h4Q60641 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Nr1h4Q60641 Cacna1c-210ENSMUST00000187474 6911 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nr1h4Q60641 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Nr1h4Q60641 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Nr1h4Q60641 Smpd4-219ENSMUST00000170366 2256 ntTSL 5 BASIC10.9□□□□□ -0.66
Nr1h4Q60641 Gm37333-201ENSMUST00000192904 2251 ntBASIC10.9□□□□□ -0.66
Nr1h4Q60641 Gm5740-201ENSMUST00000211003 1857 ntBASIC10.9□□□□□ -0.66
Nr1h4Q60641 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nr1h4Q60641 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nr1h4Q60641 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Nr1h4Q60641 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms