Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Vps54Q5SPW0 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Vps54Q5SPW0 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps54Q5SPW0 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Vps54Q5SPW0 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC13.7□□□□□ -0.22
Vps54Q5SPW0 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps54Q5SPW0 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps54Q5SPW0 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vps54Q5SPW0 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps54Q5SPW0 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps54Q5SPW0 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps54Q5SPW0 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps54Q5SPW0 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps54Q5SPW0 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps54Q5SPW0 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps54Q5SPW0 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps54Q5SPW0 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC13.7□□□□□ -0.22
Vps54Q5SPW0 Gm11892-201ENSMUST00000117711 1202 ntBASIC13.7□□□□□ -0.22
Vps54Q5SPW0 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC13.7□□□□□ -0.22
Vps54Q5SPW0 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vps54Q5SPW0 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC13.7□□□□□ -0.22
Vps54Q5SPW0 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC13.7□□□□□ -0.22
Vps54Q5SPW0 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC13.7□□□□□ -0.22
Vps54Q5SPW0 Gm22138-201ENSMUST00000158748 128 ntBASIC13.7□□□□□ -0.22
Vps54Q5SPW0 Gm9353-201ENSMUST00000200472 604 ntBASIC13.7□□□□□ -0.22
Vps54Q5SPW0 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC13.7□□□□□ -0.22
Vps54Q5SPW0 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC13.7□□□□□ -0.22
Vps54Q5SPW0 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vps54Q5SPW0 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC13.7□□□□□ -0.22
Vps54Q5SPW0 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Vps54Q5SPW0 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps54Q5SPW0 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
Vps54Q5SPW0 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps54Q5SPW0 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC13.7□□□□□ -0.22
Vps54Q5SPW0 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps54Q5SPW0 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps54Q5SPW0 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps54Q5SPW0 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps54Q5SPW0 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps54Q5SPW0 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps54Q5SPW0 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps54Q5SPW0 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps54Q5SPW0 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Vps54Q5SPW0 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps54Q5SPW0 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Vps54Q5SPW0 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps54Q5SPW0 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps54Q5SPW0 Adgrv1-214ENSMUST00000224088 1492 ntBASIC13.69□□□□□ -0.22
Vps54Q5SPW0 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps54Q5SPW0 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps54Q5SPW0 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps54Q5SPW0 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps54Q5SPW0 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC13.69□□□□□ -0.22
Vps54Q5SPW0 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Vps54Q5SPW0 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Vps54Q5SPW0 Gm13422-201ENSMUST00000118834 504 ntBASIC13.69□□□□□ -0.22
Vps54Q5SPW0 Gm11451-201ENSMUST00000118946 630 ntBASIC13.69□□□□□ -0.22
Vps54Q5SPW0 Gm12208-201ENSMUST00000122004 163 ntBASIC13.69□□□□□ -0.22
Vps54Q5SPW0 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Vps54Q5SPW0 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC13.69□□□□□ -0.22
Vps54Q5SPW0 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC13.69□□□□□ -0.22
Vps54Q5SPW0 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC13.69□□□□□ -0.22
Vps54Q5SPW0 Gm44545-201ENSMUST00000208262 746 ntBASIC13.69□□□□□ -0.22
Vps54Q5SPW0 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Vps54Q5SPW0 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps54Q5SPW0 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Vps54Q5SPW0 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps54Q5SPW0 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps54Q5SPW0 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps54Q5SPW0 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps54Q5SPW0 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC13.69□□□□□ -0.22
Vps54Q5SPW0 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps54Q5SPW0 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Vps54Q5SPW0 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC13.69□□□□□ -0.22
Vps54Q5SPW0 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps54Q5SPW0 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Vps54Q5SPW0 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps54Q5SPW0 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Vps54Q5SPW0 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps54Q5SPW0 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Vps54Q5SPW0 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps54Q5SPW0 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
Vps54Q5SPW0 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps54Q5SPW0 Gm43931-201ENSMUST00000204817 2870 ntBASIC13.68□□□□□ -0.22
Vps54Q5SPW0 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Vps54Q5SPW0 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Vps54Q5SPW0 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Vps54Q5SPW0 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Vps54Q5SPW0 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps54Q5SPW0 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC13.68□□□□□ -0.22
Vps54Q5SPW0 Gm37284-201ENSMUST00000193607 539 ntBASIC13.68□□□□□ -0.22
Vps54Q5SPW0 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC13.68□□□□□ -0.22
Vps54Q5SPW0 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC13.68□□□□□ -0.22
Vps54Q5SPW0 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC13.68□□□□□ -0.22
Vps54Q5SPW0 Gm19046-201ENSMUST00000221263 1298 ntBASIC13.68□□□□□ -0.22
Vps54Q5SPW0 AC159002.1-201ENSMUST00000226714 924 ntBASIC13.68□□□□□ -0.22
Vps54Q5SPW0 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Vps54Q5SPW0 Gm9244-201ENSMUST00000056767 2129 ntBASIC13.68□□□□□ -0.22
Vps54Q5SPW0 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC13.68□□□□□ -0.22
Vps54Q5SPW0 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms