Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Gm12407-201ENSMUST00000180219 324 ntBASIC13.63□□□□□ -0.23
Rnf20Q5DTM8 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf20Q5DTM8 Mir6927-201ENSMUST00000184494 71 ntBASIC13.63□□□□□ -0.23
Rnf20Q5DTM8 Gm7848-201ENSMUST00000210739 718 ntBASIC13.63□□□□□ -0.23
Rnf20Q5DTM8 Gm19208-201ENSMUST00000213861 912 ntBASIC13.63□□□□□ -0.23
Rnf20Q5DTM8 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC13.63□□□□□ -0.23
Rnf20Q5DTM8 CT009713.8-201ENSMUST00000225448 560 ntBASIC13.63□□□□□ -0.23
Rnf20Q5DTM8 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC13.63□□□□□ -0.23
Rnf20Q5DTM8 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf20Q5DTM8 Btrc-209ENSMUST00000224478 2194 ntBASIC13.63□□□□□ -0.23
Rnf20Q5DTM8 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf20Q5DTM8 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf20Q5DTM8 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Rnf20Q5DTM8 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC13.63□□□□□ -0.23
Rnf20Q5DTM8 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf20Q5DTM8 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf20Q5DTM8 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf20Q5DTM8 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf20Q5DTM8 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf20Q5DTM8 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf20Q5DTM8 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf20Q5DTM8 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf20Q5DTM8 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Rnf20Q5DTM8 Gm6560-201ENSMUST00000198588 1591 ntBASIC13.62□□□□□ -0.23
Rnf20Q5DTM8 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf20Q5DTM8 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf20Q5DTM8 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC13.62□□□□□ -0.23
Rnf20Q5DTM8 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf20Q5DTM8 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC13.62□□□□□ -0.23
Rnf20Q5DTM8 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf20Q5DTM8 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf20Q5DTM8 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf20Q5DTM8 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf20Q5DTM8 Gm12217-201ENSMUST00000118858 696 ntBASIC13.62□□□□□ -0.23
Rnf20Q5DTM8 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf20Q5DTM8 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC13.62□□□□□ -0.23
Rnf20Q5DTM8 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Rnf20Q5DTM8 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Rnf20Q5DTM8 Gm5732-201ENSMUST00000182596 1007 ntBASIC13.62□□□□□ -0.23
Rnf20Q5DTM8 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf20Q5DTM8 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC13.62□□□□□ -0.23
Rnf20Q5DTM8 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC13.62□□□□□ -0.23
Rnf20Q5DTM8 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC13.62□□□□□ -0.23
Rnf20Q5DTM8 AC160929.1-201ENSMUST00000221247 415 ntBASIC13.62□□□□□ -0.23
Rnf20Q5DTM8 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf20Q5DTM8 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Rnf20Q5DTM8 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf20Q5DTM8 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf20Q5DTM8 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf20Q5DTM8 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf20Q5DTM8 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf20Q5DTM8 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf20Q5DTM8 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC13.62□□□□□ -0.23
Rnf20Q5DTM8 Gm45416-201ENSMUST00000209713 2201 ntBASIC13.62□□□□□ -0.23
Rnf20Q5DTM8 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf20Q5DTM8 AC113441.2-201ENSMUST00000221538 1468 ntBASIC13.61□□□□□ -0.23
Rnf20Q5DTM8 Adgrv1-214ENSMUST00000224088 1492 ntBASIC13.61□□□□□ -0.23
Rnf20Q5DTM8 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf20Q5DTM8 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf20Q5DTM8 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf20Q5DTM8 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf20Q5DTM8 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC13.61□□□□□ -0.23
Rnf20Q5DTM8 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf20Q5DTM8 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf20Q5DTM8 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC13.61□□□□□ -0.23
Rnf20Q5DTM8 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf20Q5DTM8 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf20Q5DTM8 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf20Q5DTM8 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Rnf20Q5DTM8 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf20Q5DTM8 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Rnf20Q5DTM8 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Rnf20Q5DTM8 Gm12463-201ENSMUST00000118271 849 ntBASIC13.61□□□□□ -0.23
Rnf20Q5DTM8 Gm15595-201ENSMUST00000120840 961 ntBASIC13.61□□□□□ -0.23
Rnf20Q5DTM8 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf20Q5DTM8 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC13.61□□□□□ -0.23
Rnf20Q5DTM8 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC13.61□□□□□ -0.23
Rnf20Q5DTM8 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Rnf20Q5DTM8 Gm8342-201ENSMUST00000209839 757 ntBASIC13.61□□□□□ -0.23
Rnf20Q5DTM8 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf20Q5DTM8 Gm6722-201ENSMUST00000221586 390 ntBASIC13.61□□□□□ -0.23
Rnf20Q5DTM8 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf20Q5DTM8 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Rnf20Q5DTM8 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf20Q5DTM8 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf20Q5DTM8 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf20Q5DTM8 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC13.61□□□□□ -0.23
Rnf20Q5DTM8 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf20Q5DTM8 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf20Q5DTM8 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Rnf20Q5DTM8 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf20Q5DTM8 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC13.61□□□□□ -0.23
Rnf20Q5DTM8 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf20Q5DTM8 Gm44663-201ENSMUST00000206898 3150 ntBASIC13.61□□□□□ -0.23
Rnf20Q5DTM8 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rnf20Q5DTM8 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf20Q5DTM8 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf20Q5DTM8 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf20Q5DTM8 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rnf20Q5DTM8 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms