Protein–RNA interactions for Protein: Q3US17

Znf48, Zinc finger protein 48, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf48Q3US17 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Znf48Q3US17 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Znf48Q3US17 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Znf48Q3US17 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Znf48Q3US17 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Znf48Q3US17 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC9.78□□□□□ -0.84
Znf48Q3US17 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Znf48Q3US17 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Znf48Q3US17 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Znf48Q3US17 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC9.78□□□□□ -0.84
Znf48Q3US17 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC9.78□□□□□ -0.84
Znf48Q3US17 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC9.78□□□□□ -0.84
Znf48Q3US17 Tfpi-207ENSMUST00000111722 1232 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Znf48Q3US17 Tceal9-202ENSMUST00000113115 888 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
Znf48Q3US17 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC9.78□□□□□ -0.84
Znf48Q3US17 Gm13888-201ENSMUST00000119148 422 ntBASIC9.78□□□□□ -0.84
Znf48Q3US17 Gm13924-201ENSMUST00000119899 486 ntBASIC9.78□□□□□ -0.84
Znf48Q3US17 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC9.78□□□□□ -0.84
Znf48Q3US17 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC9.78□□□□□ -0.84
Znf48Q3US17 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Znf48Q3US17 Gm6963-201ENSMUST00000147879 379 ntBASIC9.78□□□□□ -0.84
Znf48Q3US17 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC9.78□□□□□ -0.84
Znf48Q3US17 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Znf48Q3US17 Gm8194-201ENSMUST00000159783 859 ntBASIC9.78□□□□□ -0.84
Znf48Q3US17 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC9.78□□□□□ -0.84
Znf48Q3US17 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC9.78□□□□□ -0.84
Znf48Q3US17 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC9.78□□□□□ -0.84
Znf48Q3US17 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC9.78□□□□□ -0.84
Znf48Q3US17 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC9.78□□□□□ -0.84
Znf48Q3US17 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC9.78□□□□□ -0.84
Znf48Q3US17 Gm38133-201ENSMUST00000195109 815 ntTSL 5 BASIC9.78□□□□□ -0.84
Znf48Q3US17 Gm43646-201ENSMUST00000199962 464 ntTSL 3 BASIC9.78□□□□□ -0.84
Znf48Q3US17 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Znf48Q3US17 Gm17838-201ENSMUST00000205872 876 ntBASIC9.78□□□□□ -0.84
Znf48Q3US17 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Znf48Q3US17 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Znf48Q3US17 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC9.78□□□□□ -0.84
Znf48Q3US17 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC9.78□□□□□ -0.84
Znf48Q3US17 AC153936.1-201ENSMUST00000219874 395 ntBASIC9.78□□□□□ -0.84
Znf48Q3US17 AC154527.3-201ENSMUST00000225519 989 ntBASIC9.78□□□□□ -0.84
Znf48Q3US17 AC159103.1-201ENSMUST00000228325 429 ntBASIC9.78□□□□□ -0.84
Znf48Q3US17 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Znf48Q3US17 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Znf48Q3US17 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Znf48Q3US17 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Znf48Q3US17 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Znf48Q3US17 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Znf48Q3US17 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Znf48Q3US17 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Znf48Q3US17 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Znf48Q3US17 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Znf48Q3US17 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Znf48Q3US17 AC166359.1-201ENSMUST00000220243 1871 ntBASIC9.78□□□□□ -0.84
Znf48Q3US17 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC9.78□□□□□ -0.84
Znf48Q3US17 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Znf48Q3US17 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
Znf48Q3US17 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Znf48Q3US17 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Znf48Q3US17 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Znf48Q3US17 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Znf48Q3US17 Gm6992-201ENSMUST00000217973 1607 ntBASIC9.78□□□□□ -0.84
Znf48Q3US17 Gm8617-201ENSMUST00000118796 2222 ntBASIC9.78□□□□□ -0.84
Znf48Q3US17 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Znf48Q3US17 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Znf48Q3US17 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Znf48Q3US17 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Znf48Q3US17 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC9.77□□□□□ -0.84
Znf48Q3US17 AC156031.2-201ENSMUST00000213107 3310 ntBASIC9.77□□□□□ -0.84
Znf48Q3US17 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Znf48Q3US17 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Znf48Q3US17 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.84
Znf48Q3US17 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Znf48Q3US17 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Znf48Q3US17 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.84
Znf48Q3US17 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Znf48Q3US17 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Znf48Q3US17 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Znf48Q3US17 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC9.77□□□□□ -0.85
Znf48Q3US17 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Znf48Q3US17 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC9.77□□□□□ -0.85
Znf48Q3US17 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Znf48Q3US17 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Znf48Q3US17 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Znf48Q3US17 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Znf48Q3US17 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Znf48Q3US17 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Znf48Q3US17 Gm15741-201ENSMUST00000119401 754 ntBASIC9.77□□□□□ -0.85
Znf48Q3US17 Gm14908-201ENSMUST00000120930 1286 ntBASIC9.77□□□□□ -0.85
Znf48Q3US17 Gm12291-201ENSMUST00000121627 311 ntBASIC9.77□□□□□ -0.85
Znf48Q3US17 Gm12591-201ENSMUST00000122407 1177 ntBASIC9.77□□□□□ -0.85
Znf48Q3US17 1700057H21Rik-201ENSMUST00000152467 383 ntTSL 5 BASIC9.77□□□□□ -0.85
Znf48Q3US17 Gm15819-201ENSMUST00000153089 481 ntTSL 2 BASIC9.77□□□□□ -0.85
Znf48Q3US17 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Znf48Q3US17 Gm11655-201ENSMUST00000153899 765 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Znf48Q3US17 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Znf48Q3US17 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Znf48Q3US17 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC9.77□□□□□ -0.85
Znf48Q3US17 Vmn1r-ps28-201ENSMUST00000174767 942 ntBASIC9.77□□□□□ -0.85
Znf48Q3US17 Gm16434-202ENSMUST00000177712 618 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Znf48Q3US17 Gm6676-202ENSMUST00000178376 618 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms