Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Gm28424-201ENSMUST00000187393 1319 ntBASIC12.07□□□□□ -0.48
Nlrc4Q3UP24 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nlrc4Q3UP24 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nlrc4Q3UP24 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nlrc4Q3UP24 AC122811.1-201ENSMUST00000222257 2921 ntBASIC12.07□□□□□ -0.48
Nlrc4Q3UP24 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nlrc4Q3UP24 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC12.06□□□□□ -0.48
Nlrc4Q3UP24 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC12.06□□□□□ -0.48
Nlrc4Q3UP24 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nlrc4Q3UP24 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nlrc4Q3UP24 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC12.06□□□□□ -0.48
Nlrc4Q3UP24 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nlrc4Q3UP24 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nlrc4Q3UP24 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nlrc4Q3UP24 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nlrc4Q3UP24 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nlrc4Q3UP24 Nudt13-207ENSMUST00000224311 1574 ntBASIC12.06□□□□□ -0.48
Nlrc4Q3UP24 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nlrc4Q3UP24 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nlrc4Q3UP24 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Nlrc4Q3UP24 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nlrc4Q3UP24 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nlrc4Q3UP24 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nlrc4Q3UP24 Gm22334-201ENSMUST00000158070 133 ntBASIC12.06□□□□□ -0.48
Nlrc4Q3UP24 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC12.06□□□□□ -0.48
Nlrc4Q3UP24 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC12.06□□□□□ -0.48
Nlrc4Q3UP24 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC12.06□□□□□ -0.48
Nlrc4Q3UP24 Gm37299-201ENSMUST00000193951 826 ntBASIC12.06□□□□□ -0.48
Nlrc4Q3UP24 Gm44980-201ENSMUST00000205826 314 ntBASIC12.06□□□□□ -0.48
Nlrc4Q3UP24 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nlrc4Q3UP24 Gm45856-201ENSMUST00000212752 416 ntBASIC12.06□□□□□ -0.48
Nlrc4Q3UP24 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC12.06□□□□□ -0.48
Nlrc4Q3UP24 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nlrc4Q3UP24 Gm18974-201ENSMUST00000221478 1031 ntBASIC12.06□□□□□ -0.48
Nlrc4Q3UP24 AC154680.1-201ENSMUST00000224376 859 ntBASIC12.06□□□□□ -0.48
Nlrc4Q3UP24 AC122350.1-201ENSMUST00000228135 533 ntBASIC12.06□□□□□ -0.48
Nlrc4Q3UP24 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nlrc4Q3UP24 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nlrc4Q3UP24 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nlrc4Q3UP24 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nlrc4Q3UP24 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nlrc4Q3UP24 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nlrc4Q3UP24 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nlrc4Q3UP24 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.06□□□□□ -0.48
Nlrc4Q3UP24 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nlrc4Q3UP24 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nlrc4Q3UP24 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nlrc4Q3UP24 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nlrc4Q3UP24 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Nlrc4Q3UP24 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Nlrc4Q3UP24 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nlrc4Q3UP24 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nlrc4Q3UP24 Gm43127-201ENSMUST00000195890 2789 ntBASIC12.06□□□□□ -0.48
Nlrc4Q3UP24 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nlrc4Q3UP24 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nlrc4Q3UP24 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Nlrc4Q3UP24 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nlrc4Q3UP24 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nlrc4Q3UP24 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nlrc4Q3UP24 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nlrc4Q3UP24 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nlrc4Q3UP24 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nlrc4Q3UP24 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC12.05□□□□□ -0.48
Nlrc4Q3UP24 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nlrc4Q3UP24 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nlrc4Q3UP24 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Nlrc4Q3UP24 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Nlrc4Q3UP24 Btrc-209ENSMUST00000224478 2194 ntBASIC12.05□□□□□ -0.48
Nlrc4Q3UP24 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nlrc4Q3UP24 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC12.05□□□□□ -0.48
Nlrc4Q3UP24 Gm43622-201ENSMUST00000200140 2019 ntBASIC12.05□□□□□ -0.48
Nlrc4Q3UP24 Gm45416-201ENSMUST00000209713 2201 ntBASIC12.05□□□□□ -0.48
Nlrc4Q3UP24 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nlrc4Q3UP24 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Nlrc4Q3UP24 Gm14263-201ENSMUST00000117955 746 ntBASIC12.05□□□□□ -0.48
Nlrc4Q3UP24 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nlrc4Q3UP24 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Nlrc4Q3UP24 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Nlrc4Q3UP24 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Nlrc4Q3UP24 Gm25492-201ENSMUST00000157383 129 ntBASIC12.05□□□□□ -0.48
Nlrc4Q3UP24 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC12.05□□□□□ -0.48
Nlrc4Q3UP24 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nlrc4Q3UP24 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nlrc4Q3UP24 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Nlrc4Q3UP24 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC12.05□□□□□ -0.48
Nlrc4Q3UP24 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nlrc4Q3UP24 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nlrc4Q3UP24 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC12.05□□□□□ -0.48
Nlrc4Q3UP24 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Nlrc4Q3UP24 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nlrc4Q3UP24 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nlrc4Q3UP24 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Nlrc4Q3UP24 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nlrc4Q3UP24 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nlrc4Q3UP24 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.05□□□□□ -0.48
Nlrc4Q3UP24 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nlrc4Q3UP24 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nlrc4Q3UP24 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nlrc4Q3UP24 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC12.05□□□□□ -0.48
Nlrc4Q3UP24 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 89.5 ms