Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Ccbe1Q3MI99 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Ccbe1Q3MI99 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccbe1Q3MI99 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Ccbe1Q3MI99 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC10.39□□□□□ -0.75
Ccbe1Q3MI99 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Ccbe1Q3MI99 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccbe1Q3MI99 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC10.39□□□□□ -0.75
Ccbe1Q3MI99 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Ccbe1Q3MI99 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC10.39□□□□□ -0.75
Ccbe1Q3MI99 Gm27331-201ENSMUST00000183705 60 ntBASIC10.39□□□□□ -0.75
Ccbe1Q3MI99 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccbe1Q3MI99 Gm37042-201ENSMUST00000193816 581 ntBASIC10.39□□□□□ -0.75
Ccbe1Q3MI99 Gm44397-201ENSMUST00000195950 113 ntBASIC10.39□□□□□ -0.75
Ccbe1Q3MI99 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccbe1Q3MI99 Dhrs4-202ENSMUST00000226168 828 ntBASIC10.39□□□□□ -0.75
Ccbe1Q3MI99 AC126253.1-202ENSMUST00000226732 835 ntBASIC10.39□□□□□ -0.75
Ccbe1Q3MI99 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC10.39□□□□□ -0.75
Ccbe1Q3MI99 Aldh1a3-201ENSMUST00000015278 3443 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccbe1Q3MI99 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Ccbe1Q3MI99 Rbmx-201ENSMUST00000098470 3107 ntTSL 5 BASIC10.39□□□□□ -0.75
Ccbe1Q3MI99 Mdm1-203ENSMUST00000164077 2922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccbe1Q3MI99 Tfdp1-204ENSMUST00000209885 2511 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccbe1Q3MI99 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccbe1Q3MI99 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Ccbe1Q3MI99 Gpr35-202ENSMUST00000064480 3409 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccbe1Q3MI99 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Ccbe1Q3MI99 Olfr707-205ENSMUST00000214112 1735 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Ccbe1Q3MI99 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccbe1Q3MI99 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccbe1Q3MI99 Tia1-201ENSMUST00000095752 3130 ntAPPRIS ALT1 TSL 5 BASIC10.38□□□□□ -0.75
Ccbe1Q3MI99 Msrb3-201ENSMUST00000092143 3843 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccbe1Q3MI99 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccbe1Q3MI99 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Ccbe1Q3MI99 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC10.38□□□□□ -0.75
Ccbe1Q3MI99 Vipas39-202ENSMUST00000072744 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccbe1Q3MI99 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Ccbe1Q3MI99 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Ccbe1Q3MI99 9430064I24Rik-201ENSMUST00000206516 2669 ntBASIC10.38□□□□□ -0.75
Ccbe1Q3MI99 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccbe1Q3MI99 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccbe1Q3MI99 Gm23912-201ENSMUST00000104687 87 ntBASIC10.38□□□□□ -0.75
Ccbe1Q3MI99 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC10.38□□□□□ -0.75
Ccbe1Q3MI99 Gm13315-201ENSMUST00000120376 991 ntBASIC10.38□□□□□ -0.75
Ccbe1Q3MI99 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Ccbe1Q3MI99 Mir1894-201ENSMUST00000122802 81 ntBASIC10.38□□□□□ -0.75
Ccbe1Q3MI99 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC10.38□□□□□ -0.75
Ccbe1Q3MI99 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC10.38□□□□□ -0.75
Ccbe1Q3MI99 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC10.38□□□□□ -0.75
Ccbe1Q3MI99 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Ccbe1Q3MI99 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccbe1Q3MI99 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC10.38□□□□□ -0.75
Ccbe1Q3MI99 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC10.38□□□□□ -0.75
Ccbe1Q3MI99 Gm38314-201ENSMUST00000195709 625 ntBASIC10.38□□□□□ -0.75
Ccbe1Q3MI99 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC10.38□□□□□ -0.75
Ccbe1Q3MI99 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccbe1Q3MI99 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Ccbe1Q3MI99 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Ccbe1Q3MI99 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC10.38□□□□□ -0.75
Ccbe1Q3MI99 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccbe1Q3MI99 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Ccbe1Q3MI99 Apol11b-204ENSMUST00000181467 1933 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Ccbe1Q3MI99 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC10.38□□□□□ -0.75
Ccbe1Q3MI99 D130017N08Rik-202ENSMUST00000180951 2573 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Ccbe1Q3MI99 Gm37131-201ENSMUST00000192502 1561 ntBASIC10.38□□□□□ -0.75
Ccbe1Q3MI99 Exoc7-202ENSMUST00000106411 3205 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccbe1Q3MI99 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccbe1Q3MI99 Pax6-204ENSMUST00000111083 2370 ntAPPRIS ALT1 TSL 5 BASIC10.38□□□□□ -0.75
Ccbe1Q3MI99 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Ccbe1Q3MI99 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Ccbe1Q3MI99 Itgad-201ENSMUST00000033051 3965 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccbe1Q3MI99 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Ccbe1Q3MI99 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccbe1Q3MI99 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Ccbe1Q3MI99 Cts7-201ENSMUST00000021892 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccbe1Q3MI99 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Ccbe1Q3MI99 Serac1-202ENSMUST00000097432 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccbe1Q3MI99 Ndn-201ENSMUST00000038775 3694 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Ccbe1Q3MI99 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC10.37□□□□□ -0.75
Ccbe1Q3MI99 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Ccbe1Q3MI99 Setmar-201ENSMUST00000049246 1612 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccbe1Q3MI99 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Ccbe1Q3MI99 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccbe1Q3MI99 Gm26527-201ENSMUST00000180416 1948 ntTSL 5 BASIC10.37□□□□□ -0.75
Ccbe1Q3MI99 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccbe1Q3MI99 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccbe1Q3MI99 Olfr429-202ENSMUST00000216346 2510 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
Ccbe1Q3MI99 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Ccbe1Q3MI99 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccbe1Q3MI99 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Ccbe1Q3MI99 Sf3b5-201ENSMUST00000105139 3841 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Ccbe1Q3MI99 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Ccbe1Q3MI99 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccbe1Q3MI99 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Ccbe1Q3MI99 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccbe1Q3MI99 Gm13226-201ENSMUST00000117838 404 ntBASIC10.37□□□□□ -0.75
Ccbe1Q3MI99 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccbe1Q3MI99 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Ccbe1Q3MI99 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Ccbe1Q3MI99 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC10.37□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms