Protein–RNA interactions for Protein: Q2EG98

Pkd1l3, Polycystic kidney disease protein 1-like 3, mousemouse

Predictions only

Length 2,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1l3Q2EG98 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pkd1l3Q2EG98 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Pkd1l3Q2EG98 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pkd1l3Q2EG98 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pkd1l3Q2EG98 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Pkd1l3Q2EG98 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Pkd1l3Q2EG98 Gm43172-201ENSMUST00000202139 2137 ntBASIC10.25□□□□□ -0.77
Pkd1l3Q2EG98 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pkd1l3Q2EG98 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pkd1l3Q2EG98 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Pkd1l3Q2EG98 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Pkd1l3Q2EG98 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pkd1l3Q2EG98 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pkd1l3Q2EG98 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pkd1l3Q2EG98 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Pkd1l3Q2EG98 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pkd1l3Q2EG98 Gm4993-201ENSMUST00000118719 1174 ntBASIC10.25□□□□□ -0.77
Pkd1l3Q2EG98 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Pkd1l3Q2EG98 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC10.25□□□□□ -0.77
Pkd1l3Q2EG98 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC10.25□□□□□ -0.77
Pkd1l3Q2EG98 Gm24992-201ENSMUST00000157412 130 ntBASIC10.25□□□□□ -0.77
Pkd1l3Q2EG98 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Pkd1l3Q2EG98 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Pkd1l3Q2EG98 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC10.25□□□□□ -0.77
Pkd1l3Q2EG98 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC10.25□□□□□ -0.77
Pkd1l3Q2EG98 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Pkd1l3Q2EG98 AC153152.3-201ENSMUST00000222188 1135 ntBASIC10.25□□□□□ -0.77
Pkd1l3Q2EG98 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Pkd1l3Q2EG98 Olfr584-201ENSMUST00000098210 964 ntBASIC10.25□□□□□ -0.77
Pkd1l3Q2EG98 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pkd1l3Q2EG98 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Pkd1l3Q2EG98 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
Pkd1l3Q2EG98 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Pkd1l3Q2EG98 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pkd1l3Q2EG98 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC10.24□□□□□ -0.77
Pkd1l3Q2EG98 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Pkd1l3Q2EG98 AC108858.2-201ENSMUST00000228186 1425 ntBASIC10.24□□□□□ -0.77
Pkd1l3Q2EG98 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Pkd1l3Q2EG98 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Pkd1l3Q2EG98 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pkd1l3Q2EG98 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pkd1l3Q2EG98 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pkd1l3Q2EG98 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pkd1l3Q2EG98 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Pkd1l3Q2EG98 Gm43174-201ENSMUST00000195914 2445 ntBASIC10.24□□□□□ -0.77
Pkd1l3Q2EG98 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pkd1l3Q2EG98 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC10.24□□□□□ -0.77
Pkd1l3Q2EG98 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC10.24□□□□□ -0.77
Pkd1l3Q2EG98 Gm11980-201ENSMUST00000121445 986 ntBASIC10.24□□□□□ -0.77
Pkd1l3Q2EG98 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC10.24□□□□□ -0.77
Pkd1l3Q2EG98 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC10.24□□□□□ -0.77
Pkd1l3Q2EG98 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pkd1l3Q2EG98 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Pkd1l3Q2EG98 Gm27390-201ENSMUST00000184516 176 ntBASIC10.24□□□□□ -0.77
Pkd1l3Q2EG98 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Pkd1l3Q2EG98 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Pkd1l3Q2EG98 Gm7959-201ENSMUST00000221823 1078 ntBASIC10.24□□□□□ -0.77
Pkd1l3Q2EG98 AC122346.3-201ENSMUST00000223983 306 ntBASIC10.24□□□□□ -0.77
Pkd1l3Q2EG98 CT030653.1-201ENSMUST00000224382 1279 ntBASIC10.24□□□□□ -0.77
Pkd1l3Q2EG98 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Pkd1l3Q2EG98 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Pkd1l3Q2EG98 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Pkd1l3Q2EG98 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pkd1l3Q2EG98 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pkd1l3Q2EG98 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pkd1l3Q2EG98 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Pkd1l3Q2EG98 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pkd1l3Q2EG98 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC10.24□□□□□ -0.77
Pkd1l3Q2EG98 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pkd1l3Q2EG98 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pkd1l3Q2EG98 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pkd1l3Q2EG98 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Pkd1l3Q2EG98 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Pkd1l3Q2EG98 Gm42480-201ENSMUST00000198434 2595 ntBASIC10.24□□□□□ -0.77
Pkd1l3Q2EG98 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Pkd1l3Q2EG98 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Pkd1l3Q2EG98 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pkd1l3Q2EG98 Slc1a4-202ENSMUST00000109594 3926 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pkd1l3Q2EG98 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Pkd1l3Q2EG98 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pkd1l3Q2EG98 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pkd1l3Q2EG98 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pkd1l3Q2EG98 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pkd1l3Q2EG98 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Pkd1l3Q2EG98 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pkd1l3Q2EG98 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Pkd1l3Q2EG98 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
Pkd1l3Q2EG98 Mir1905-201ENSMUST00000122779 82 ntBASIC10.23□□□□□ -0.77
Pkd1l3Q2EG98 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC10.23□□□□□ -0.77
Pkd1l3Q2EG98 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC10.23□□□□□ -0.77
Pkd1l3Q2EG98 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC10.23□□□□□ -0.77
Pkd1l3Q2EG98 Gm8197-202ENSMUST00000193422 934 ntBASIC10.23□□□□□ -0.77
Pkd1l3Q2EG98 Gm34379-201ENSMUST00000195036 290 ntBASIC10.23□□□□□ -0.77
Pkd1l3Q2EG98 Gm19091-201ENSMUST00000208120 978 ntBASIC10.23□□□□□ -0.77
Pkd1l3Q2EG98 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC10.23□□□□□ -0.77
Pkd1l3Q2EG98 AC153929.1-201ENSMUST00000219009 303 ntBASIC10.23□□□□□ -0.77
Pkd1l3Q2EG98 Gm10254-201ENSMUST00000052888 867 ntBASIC10.23□□□□□ -0.77
Pkd1l3Q2EG98 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC10.23□□□□□ -0.77
Pkd1l3Q2EG98 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pkd1l3Q2EG98 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms