Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Col9a2Q07643 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Col9a2Q07643 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col9a2Q07643 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Col9a2Q07643 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col9a2Q07643 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col9a2Q07643 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col9a2Q07643 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col9a2Q07643 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col9a2Q07643 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col9a2Q07643 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col9a2Q07643 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col9a2Q07643 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC12.38□□□□□ -0.43
Col9a2Q07643 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Col9a2Q07643 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col9a2Q07643 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col9a2Q07643 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col9a2Q07643 Btrc-209ENSMUST00000224478 2194 ntBASIC12.37□□□□□ -0.43
Col9a2Q07643 Gm42941-201ENSMUST00000200347 1321 ntBASIC12.37□□□□□ -0.43
Col9a2Q07643 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col9a2Q07643 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Col9a2Q07643 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Col9a2Q07643 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Col9a2Q07643 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col9a2Q07643 AC155245.1-201ENSMUST00000222266 1804 ntBASIC12.37□□□□□ -0.43
Col9a2Q07643 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Col9a2Q07643 Gm45416-201ENSMUST00000209713 2201 ntBASIC12.37□□□□□ -0.43
Col9a2Q07643 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col9a2Q07643 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col9a2Q07643 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Col9a2Q07643 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col9a2Q07643 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC12.37□□□□□ -0.43
Col9a2Q07643 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Col9a2Q07643 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC12.37□□□□□ -0.43
Col9a2Q07643 Gm16219-201ENSMUST00000120096 274 ntBASIC12.37□□□□□ -0.43
Col9a2Q07643 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC12.37□□□□□ -0.43
Col9a2Q07643 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC12.37□□□□□ -0.43
Col9a2Q07643 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Col9a2Q07643 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC12.37□□□□□ -0.43
Col9a2Q07643 Gm5700-201ENSMUST00000191483 989 ntBASIC12.37□□□□□ -0.43
Col9a2Q07643 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Col9a2Q07643 Gm37284-201ENSMUST00000193607 539 ntBASIC12.37□□□□□ -0.43
Col9a2Q07643 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC12.37□□□□□ -0.43
Col9a2Q07643 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col9a2Q07643 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Col9a2Q07643 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Col9a2Q07643 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col9a2Q07643 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Col9a2Q07643 Gm6157-201ENSMUST00000199935 1897 ntBASIC12.37□□□□□ -0.43
Col9a2Q07643 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.37□□□□□ -0.43
Col9a2Q07643 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Col9a2Q07643 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Col9a2Q07643 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Col9a2Q07643 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col9a2Q07643 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col9a2Q07643 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Col9a2Q07643 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col9a2Q07643 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC12.37□□□□□ -0.43
Col9a2Q07643 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC12.37□□□□□ -0.43
Col9a2Q07643 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col9a2Q07643 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col9a2Q07643 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col9a2Q07643 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Col9a2Q07643 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Col9a2Q07643 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Col9a2Q07643 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col9a2Q07643 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC12.36□□□□□ -0.43
Col9a2Q07643 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col9a2Q07643 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col9a2Q07643 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col9a2Q07643 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col9a2Q07643 Adgrv1-214ENSMUST00000224088 1492 ntBASIC12.36□□□□□ -0.43
Col9a2Q07643 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Col9a2Q07643 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col9a2Q07643 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col9a2Q07643 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Col9a2Q07643 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Col9a2Q07643 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Col9a2Q07643 Gm3828-201ENSMUST00000121817 257 ntBASIC12.36□□□□□ -0.43
Col9a2Q07643 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC12.36□□□□□ -0.43
Col9a2Q07643 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC12.36□□□□□ -0.43
Col9a2Q07643 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Col9a2Q07643 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Col9a2Q07643 Gm42655-201ENSMUST00000202782 1134 ntBASIC12.36□□□□□ -0.43
Col9a2Q07643 Gm44552-201ENSMUST00000205458 1247 ntBASIC12.36□□□□□ -0.43
Col9a2Q07643 Gm18706-201ENSMUST00000210053 1066 ntBASIC12.36□□□□□ -0.43
Col9a2Q07643 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC12.36□□□□□ -0.43
Col9a2Q07643 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Col9a2Q07643 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Col9a2Q07643 Gm25580-201ENSMUST00000083409 327 ntBASIC12.36□□□□□ -0.43
Col9a2Q07643 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col9a2Q07643 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col9a2Q07643 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col9a2Q07643 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col9a2Q07643 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col9a2Q07643 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Col9a2Q07643 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col9a2Q07643 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Col9a2Q07643 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col9a2Q07643 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms