Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Vmn1r166-201ENSMUST00000164045 921 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Col9a1Q05722 Gm8453-201ENSMUST00000167253 921 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Col9a1Q05722 Gm4498-201ENSMUST00000168580 921 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Col9a1Q05722 Vmn1r118-201ENSMUST00000172322 921 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Col9a1Q05722 Gm8693-201ENSMUST00000178871 921 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Col9a1Q05722 Vmn1r138-201ENSMUST00000179206 921 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Col9a1Q05722 Vmn1r131-201ENSMUST00000179390 921 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Col9a1Q05722 Vmn1r111-201ENSMUST00000179511 921 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Col9a1Q05722 Gm24466-201ENSMUST00000179978 109 ntBASIC11.68□□□□□ -0.54
Col9a1Q05722 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC11.68□□□□□ -0.54
Col9a1Q05722 Gm9578-201ENSMUST00000182354 753 ntBASIC11.68□□□□□ -0.54
Col9a1Q05722 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC11.68□□□□□ -0.54
Col9a1Q05722 Gm27444-201ENSMUST00000184157 137 ntBASIC11.68□□□□□ -0.54
Col9a1Q05722 Gm27817-201ENSMUST00000184302 233 ntBASIC11.68□□□□□ -0.54
Col9a1Q05722 1500015A07Rik-202ENSMUST00000184530 423 ntTSL 3 BASIC11.68□□□□□ -0.54
Col9a1Q05722 Gm29191-201ENSMUST00000185427 621 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Col9a1Q05722 Gm28750-201ENSMUST00000186327 658 ntTSL 5 BASIC11.68□□□□□ -0.54
Col9a1Q05722 Gm29426-202ENSMUST00000186564 536 ntTSL 5 BASIC11.68□□□□□ -0.54
Col9a1Q05722 Gm28486-201ENSMUST00000188443 621 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Col9a1Q05722 Gm37934-201ENSMUST00000192902 402 ntBASIC11.68□□□□□ -0.54
Col9a1Q05722 Gm34716-201ENSMUST00000194060 621 ntTSL 5 BASIC11.68□□□□□ -0.54
Col9a1Q05722 Gm44392-201ENSMUST00000196758 115 ntBASIC11.68□□□□□ -0.54
Col9a1Q05722 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Col9a1Q05722 Gm43249-201ENSMUST00000200464 458 ntBASIC11.68□□□□□ -0.54
Col9a1Q05722 Gm43506-201ENSMUST00000200675 753 ntBASIC11.68□□□□□ -0.54
Col9a1Q05722 Gm19065-202ENSMUST00000203910 1165 ntBASIC11.68□□□□□ -0.54
Col9a1Q05722 Gm18690-201ENSMUST00000204488 985 ntBASIC11.68□□□□□ -0.54
Col9a1Q05722 Gm45607-201ENSMUST00000211143 678 ntTSL 3 BASIC11.68□□□□□ -0.54
Col9a1Q05722 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC11.68□□□□□ -0.54
Col9a1Q05722 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Col9a1Q05722 AC160966.1-201ENSMUST00000217147 933 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Col9a1Q05722 AC116465.1-201ENSMUST00000220324 235 ntBASIC11.68□□□□□ -0.54
Col9a1Q05722 Gm19046-201ENSMUST00000221263 1298 ntBASIC11.68□□□□□ -0.54
Col9a1Q05722 CT010456.2-201ENSMUST00000222665 1053 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Col9a1Q05722 CT009527.1-201ENSMUST00000224205 339 ntBASIC11.68□□□□□ -0.54
Col9a1Q05722 CT009550.1-201ENSMUST00000225750 864 ntBASIC11.68□□□□□ -0.54
Col9a1Q05722 Arhgdib-201ENSMUST00000032344 1193 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col9a1Q05722 Rps9-201ENSMUST00000006496 751 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col9a1Q05722 Gm5142-201ENSMUST00000066558 626 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col9a1Q05722 Gm23105-201ENSMUST00000083719 134 ntBASIC11.68□□□□□ -0.54
Col9a1Q05722 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Col9a1Q05722 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col9a1Q05722 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Col9a1Q05722 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col9a1Q05722 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col9a1Q05722 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col9a1Q05722 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC11.68□□□□□ -0.54
Col9a1Q05722 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Col9a1Q05722 Cyp2a21-ps-201ENSMUST00000206638 1471 ntBASIC11.68□□□□□ -0.54
Col9a1Q05722 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Col9a1Q05722 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col9a1Q05722 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col9a1Q05722 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col9a1Q05722 Gm18594-201ENSMUST00000175733 1403 ntBASIC11.68□□□□□ -0.54
Col9a1Q05722 Gm45546-201ENSMUST00000211053 2394 ntBASIC11.68□□□□□ -0.54
Col9a1Q05722 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col9a1Q05722 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col9a1Q05722 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col9a1Q05722 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Col9a1Q05722 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col9a1Q05722 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col9a1Q05722 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col9a1Q05722 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col9a1Q05722 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col9a1Q05722 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col9a1Q05722 Gm37861-201ENSMUST00000193534 2869 ntBASIC11.67□□□□□ -0.54
Col9a1Q05722 Gpx6-201ENSMUST00000004453 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col9a1Q05722 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col9a1Q05722 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Col9a1Q05722 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col9a1Q05722 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col9a1Q05722 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.67□□□□□ -0.54
Col9a1Q05722 Gm22495-201ENSMUST00000104492 126 ntBASIC11.67□□□□□ -0.54
Col9a1Q05722 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Col9a1Q05722 E030025P04Rik-201ENSMUST00000106710 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col9a1Q05722 Gm16418-201ENSMUST00000118577 171 ntBASIC11.67□□□□□ -0.54
Col9a1Q05722 Naa38-204ENSMUST00000144531 671 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col9a1Q05722 Gm6471-202ENSMUST00000148734 587 ntTSL 2 BASIC11.67□□□□□ -0.54
Col9a1Q05722 Gm17225-201ENSMUST00000172051 497 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Col9a1Q05722 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC11.67□□□□□ -0.54
Col9a1Q05722 Gm6113-201ENSMUST00000180319 639 ntBASIC11.67□□□□□ -0.54
Col9a1Q05722 Gm26692-201ENSMUST00000180428 688 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Col9a1Q05722 Gm7572-201ENSMUST00000182616 766 ntBASIC11.67□□□□□ -0.54
Col9a1Q05722 Mir124-2hg-203ENSMUST00000186923 673 ntTSL 3 BASIC11.67□□□□□ -0.54
Col9a1Q05722 Gm42687-201ENSMUST00000199075 164 ntBASIC11.67□□□□□ -0.54
Col9a1Q05722 Gm8956-201ENSMUST00000203939 825 ntBASIC11.67□□□□□ -0.54
Col9a1Q05722 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC11.67□□□□□ -0.54
Col9a1Q05722 Gm5307-201ENSMUST00000204772 760 ntBASIC11.67□□□□□ -0.54
Col9a1Q05722 Kcne3-205ENSMUST00000207358 1154 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Col9a1Q05722 Gm20586-201ENSMUST00000210122 547 ntBASIC11.67□□□□□ -0.54
Col9a1Q05722 Olfr274-ps1-201ENSMUST00000216601 595 ntBASIC11.67□□□□□ -0.54
Col9a1Q05722 Gm30853-201ENSMUST00000218367 810 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Col9a1Q05722 Gm6859-201ENSMUST00000218614 989 ntBASIC11.67□□□□□ -0.54
Col9a1Q05722 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC11.67□□□□□ -0.54
Col9a1Q05722 CU024892.1-201ENSMUST00000224869 515 ntBASIC11.67□□□□□ -0.54
Col9a1Q05722 CT010480.2-201ENSMUST00000225424 737 ntBASIC11.67□□□□□ -0.54
Col9a1Q05722 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col9a1Q05722 Olfr1394-201ENSMUST00000052668 939 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Col9a1Q05722 Rpl9-201ENSMUST00000057885 738 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col9a1Q05722 Olfr1329-201ENSMUST00000071979 942 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms