Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
GabpaQ00422 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
GabpaQ00422 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
GabpaQ00422 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
GabpaQ00422 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC12.96□□□□□ -0.33
GabpaQ00422 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC12.96□□□□□ -0.33
GabpaQ00422 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.96□□□□□ -0.33
GabpaQ00422 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
GabpaQ00422 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
GabpaQ00422 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
GabpaQ00422 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
GabpaQ00422 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
GabpaQ00422 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC12.96□□□□□ -0.33
GabpaQ00422 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
GabpaQ00422 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC12.96□□□□□ -0.33
GabpaQ00422 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
GabpaQ00422 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
GabpaQ00422 Gm17192-201ENSMUST00000169031 511 ntBASIC12.96□□□□□ -0.33
GabpaQ00422 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
GabpaQ00422 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
GabpaQ00422 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
GabpaQ00422 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
GabpaQ00422 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
GabpaQ00422 Gm26982-201ENSMUST00000182250 1151 ntBASIC12.96□□□□□ -0.33
GabpaQ00422 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC12.96□□□□□ -0.33
GabpaQ00422 Gm43966-201ENSMUST00000203301 612 ntBASIC12.96□□□□□ -0.33
GabpaQ00422 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
GabpaQ00422 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC12.96□□□□□ -0.33
GabpaQ00422 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC12.96□□□□□ -0.33
GabpaQ00422 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
GabpaQ00422 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
GabpaQ00422 Paupar-201ENSMUST00000194826 3482 ntBASIC12.96□□□□□ -0.33
GabpaQ00422 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
GabpaQ00422 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
GabpaQ00422 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
GabpaQ00422 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
GabpaQ00422 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
GabpaQ00422 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
GabpaQ00422 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GabpaQ00422 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
GabpaQ00422 Gm44573-201ENSMUST00000191753 2370 ntBASIC12.95□□□□□ -0.34
GabpaQ00422 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.95□□□□□ -0.34
GabpaQ00422 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
GabpaQ00422 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
GabpaQ00422 Gm43334-201ENSMUST00000197740 1318 ntBASIC12.95□□□□□ -0.34
GabpaQ00422 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
GabpaQ00422 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
GabpaQ00422 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
GabpaQ00422 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
GabpaQ00422 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
GabpaQ00422 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GabpaQ00422 Gm15197-201ENSMUST00000120526 478 ntBASIC12.95□□□□□ -0.34
GabpaQ00422 Gm13284-201ENSMUST00000121020 547 ntBASIC12.95□□□□□ -0.34
GabpaQ00422 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC12.95□□□□□ -0.34
GabpaQ00422 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
GabpaQ00422 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC12.95□□□□□ -0.34
GabpaQ00422 Gm7593-201ENSMUST00000187246 644 ntBASIC12.95□□□□□ -0.34
GabpaQ00422 Gm28833-201ENSMUST00000189671 559 ntBASIC12.95□□□□□ -0.34
GabpaQ00422 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
GabpaQ00422 Gm9369-201ENSMUST00000196009 733 ntBASIC12.95□□□□□ -0.34
GabpaQ00422 AC124457.1-201ENSMUST00000198845 120 ntBASIC12.95□□□□□ -0.34
GabpaQ00422 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC12.95□□□□□ -0.34
GabpaQ00422 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC12.95□□□□□ -0.34
GabpaQ00422 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
GabpaQ00422 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
GabpaQ00422 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GabpaQ00422 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC12.95□□□□□ -0.34
GabpaQ00422 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
GabpaQ00422 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GabpaQ00422 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
GabpaQ00422 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GabpaQ00422 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
GabpaQ00422 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
GabpaQ00422 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GabpaQ00422 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
GabpaQ00422 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GabpaQ00422 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GabpaQ00422 Gm9915-201ENSMUST00000066196 1383 ntBASIC12.94□□□□□ -0.34
GabpaQ00422 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
GabpaQ00422 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
GabpaQ00422 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
GabpaQ00422 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
GabpaQ00422 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
GabpaQ00422 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
GabpaQ00422 Gm18798-201ENSMUST00000187264 1700 ntBASIC12.94□□□□□ -0.34
GabpaQ00422 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC12.94□□□□□ -0.34
GabpaQ00422 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
GabpaQ00422 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
GabpaQ00422 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
GabpaQ00422 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
GabpaQ00422 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC12.94□□□□□ -0.34
GabpaQ00422 Gm15784-201ENSMUST00000120260 1462 ntBASIC12.94□□□□□ -0.34
GabpaQ00422 Gm13600-201ENSMUST00000117949 744 ntBASIC12.94□□□□□ -0.34
GabpaQ00422 Gm15617-201ENSMUST00000118973 771 ntBASIC12.94□□□□□ -0.34
GabpaQ00422 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
GabpaQ00422 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC12.94□□□□□ -0.34
GabpaQ00422 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC12.94□□□□□ -0.34
GabpaQ00422 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
GabpaQ00422 Gm19246-201ENSMUST00000173599 255 ntBASIC12.94□□□□□ -0.34
GabpaQ00422 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms