Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CiitaP79621 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC12.4□□□□□ -0.42
CiitaP79621 AC132901.1-201ENSMUST00000224345 508 ntBASIC12.4□□□□□ -0.42
CiitaP79621 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
CiitaP79621 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
CiitaP79621 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CiitaP79621 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CiitaP79621 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CiitaP79621 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CiitaP79621 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.4□□□□□ -0.42
CiitaP79621 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
CiitaP79621 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CiitaP79621 Gm37859-201ENSMUST00000195529 2173 ntBASIC12.4□□□□□ -0.42
CiitaP79621 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CiitaP79621 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
CiitaP79621 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
CiitaP79621 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CiitaP79621 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.4□□□□□ -0.43
CiitaP79621 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
CiitaP79621 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
CiitaP79621 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
CiitaP79621 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.43
CiitaP79621 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.43
CiitaP79621 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
CiitaP79621 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
CiitaP79621 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
CiitaP79621 Gm45416-201ENSMUST00000209713 2201 ntBASIC12.39□□□□□ -0.43
CiitaP79621 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
CiitaP79621 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CiitaP79621 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC12.39□□□□□ -0.43
CiitaP79621 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CiitaP79621 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
CiitaP79621 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.39□□□□□ -0.43
CiitaP79621 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CiitaP79621 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
CiitaP79621 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CiitaP79621 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
CiitaP79621 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
CiitaP79621 Gm15617-201ENSMUST00000118973 771 ntBASIC12.39□□□□□ -0.43
CiitaP79621 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CiitaP79621 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CiitaP79621 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CiitaP79621 Gm18561-201ENSMUST00000206027 804 ntBASIC12.39□□□□□ -0.43
CiitaP79621 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC12.39□□□□□ -0.43
CiitaP79621 Gm39288-201ENSMUST00000210554 446 ntBASIC12.39□□□□□ -0.43
CiitaP79621 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC12.39□□□□□ -0.43
CiitaP79621 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CiitaP79621 CT009527.1-201ENSMUST00000224205 339 ntBASIC12.39□□□□□ -0.43
CiitaP79621 Lgi3-203ENSMUST00000226548 1001 ntBASIC12.39□□□□□ -0.43
CiitaP79621 AC165154.1-201ENSMUST00000226661 340 ntBASIC12.39□□□□□ -0.43
CiitaP79621 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CiitaP79621 Gm10254-201ENSMUST00000052888 867 ntBASIC12.39□□□□□ -0.43
CiitaP79621 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CiitaP79621 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CiitaP79621 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CiitaP79621 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CiitaP79621 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CiitaP79621 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
CiitaP79621 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
CiitaP79621 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CiitaP79621 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CiitaP79621 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CiitaP79621 AC154537.1-201ENSMUST00000226101 1304 ntBASIC12.38□□□□□ -0.43
CiitaP79621 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CiitaP79621 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CiitaP79621 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
CiitaP79621 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.38□□□□□ -0.43
CiitaP79621 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CiitaP79621 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CiitaP79621 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CiitaP79621 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CiitaP79621 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC12.38□□□□□ -0.43
CiitaP79621 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CiitaP79621 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.38□□□□□ -0.43
CiitaP79621 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CiitaP79621 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CiitaP79621 Btrc-209ENSMUST00000224478 2194 ntBASIC12.38□□□□□ -0.43
CiitaP79621 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CiitaP79621 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CiitaP79621 Gm22442-201ENSMUST00000157256 144 ntBASIC12.38□□□□□ -0.43
CiitaP79621 Mir6407-201ENSMUST00000184510 101 ntBASIC12.38□□□□□ -0.43
CiitaP79621 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
CiitaP79621 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC12.38□□□□□ -0.43
CiitaP79621 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC12.38□□□□□ -0.43
CiitaP79621 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC12.38□□□□□ -0.43
CiitaP79621 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC12.38□□□□□ -0.43
CiitaP79621 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC12.38□□□□□ -0.43
CiitaP79621 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CiitaP79621 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
CiitaP79621 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
CiitaP79621 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CiitaP79621 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CiitaP79621 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CiitaP79621 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CiitaP79621 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC12.38□□□□□ -0.43
CiitaP79621 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CiitaP79621 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CiitaP79621 Gm18806-201ENSMUST00000207607 1775 ntBASIC12.38□□□□□ -0.43
CiitaP79621 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CiitaP79621 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms