Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC10.11□□□□□ -0.79
Sec61a1P61620 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Sec61a1P61620 Gm43447-201ENSMUST00000198471 1535 ntBASIC10.11□□□□□ -0.79
Sec61a1P61620 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Sec61a1P61620 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Sec61a1P61620 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Sec61a1P61620 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Sec61a1P61620 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Sec61a1P61620 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Sec61a1P61620 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Sec61a1P61620 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Sec61a1P61620 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Sec61a1P61620 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC10.1□□□□□ -0.79
Sec61a1P61620 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Sec61a1P61620 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Sec61a1P61620 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Sec61a1P61620 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Sec61a1P61620 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Sec61a1P61620 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Sec61a1P61620 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Sec61a1P61620 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Sec61a1P61620 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Sec61a1P61620 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Sec61a1P61620 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC10.1□□□□□ -0.79
Sec61a1P61620 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Sec61a1P61620 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Sec61a1P61620 AC207128.2-201ENSMUST00000223708 1924 ntBASIC10.1□□□□□ -0.79
Sec61a1P61620 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Sec61a1P61620 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Sec61a1P61620 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC10.1□□□□□ -0.79
Sec61a1P61620 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Sec61a1P61620 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Sec61a1P61620 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Sec61a1P61620 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC10.1□□□□□ -0.79
Sec61a1P61620 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC10.1□□□□□ -0.79
Sec61a1P61620 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC10.1□□□□□ -0.79
Sec61a1P61620 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC10.1□□□□□ -0.79
Sec61a1P61620 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC10.1□□□□□ -0.79
Sec61a1P61620 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC10.1□□□□□ -0.79
Sec61a1P61620 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Sec61a1P61620 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Sec61a1P61620 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Sec61a1P61620 Mir5132-201ENSMUST00000175166 71 ntBASIC10.1□□□□□ -0.79
Sec61a1P61620 Mir6927-201ENSMUST00000184494 71 ntBASIC10.1□□□□□ -0.79
Sec61a1P61620 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC10.1□□□□□ -0.79
Sec61a1P61620 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Sec61a1P61620 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC10.1□□□□□ -0.79
Sec61a1P61620 Aprt-ps-201ENSMUST00000212311 505 ntBASIC10.1□□□□□ -0.79
Sec61a1P61620 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Sec61a1P61620 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Sec61a1P61620 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Sec61a1P61620 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Sec61a1P61620 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Sec61a1P61620 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Sec61a1P61620 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Sec61a1P61620 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Sec61a1P61620 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Sec61a1P61620 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC10.1□□□□□ -0.79
Sec61a1P61620 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Sec61a1P61620 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Sec61a1P61620 Gm7964-201ENSMUST00000051522 1378 ntBASIC10.1□□□□□ -0.79
Sec61a1P61620 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Sec61a1P61620 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Sec61a1P61620 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Sec61a1P61620 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Sec61a1P61620 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Sec61a1P61620 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Sec61a1P61620 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC10.1□□□□□ -0.79
Sec61a1P61620 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC10.09□□□□□ -0.79
Sec61a1P61620 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sec61a1P61620 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sec61a1P61620 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sec61a1P61620 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Sec61a1P61620 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sec61a1P61620 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sec61a1P61620 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sec61a1P61620 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Sec61a1P61620 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Sec61a1P61620 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sec61a1P61620 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sec61a1P61620 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sec61a1P61620 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sec61a1P61620 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sec61a1P61620 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sec61a1P61620 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sec61a1P61620 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Sec61a1P61620 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sec61a1P61620 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
Sec61a1P61620 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sec61a1P61620 Gm15172-201ENSMUST00000118945 1046 ntBASIC10.09□□□□□ -0.79
Sec61a1P61620 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Sec61a1P61620 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Sec61a1P61620 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Sec61a1P61620 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC10.09□□□□□ -0.79
Sec61a1P61620 Gm9445-201ENSMUST00000207454 1285 ntBASIC10.09□□□□□ -0.79
Sec61a1P61620 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Sec61a1P61620 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sec61a1P61620 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC10.09□□□□□ -0.79
Sec61a1P61620 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Sec61a1P61620 AC154252.2-201ENSMUST00000223593 767 ntBASIC10.09□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms