Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sf3b6P59708 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC10.18□□□□□ -0.78
Sf3b6P59708 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Sf3b6P59708 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sf3b6P59708 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sf3b6P59708 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sf3b6P59708 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC10.18□□□□□ -0.78
Sf3b6P59708 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sf3b6P59708 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Sf3b6P59708 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Sf3b6P59708 Gm44826-201ENSMUST00000207648 2332 ntBASIC10.18□□□□□ -0.78
Sf3b6P59708 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sf3b6P59708 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sf3b6P59708 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sf3b6P59708 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Sf3b6P59708 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sf3b6P59708 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Sf3b6P59708 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Sf3b6P59708 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sf3b6P59708 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
Sf3b6P59708 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC10.18□□□□□ -0.78
Sf3b6P59708 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Sf3b6P59708 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Sf3b6P59708 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Sf3b6P59708 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sf3b6P59708 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sf3b6P59708 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sf3b6P59708 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sf3b6P59708 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sf3b6P59708 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Sf3b6P59708 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Sf3b6P59708 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Sf3b6P59708 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Sf3b6P59708 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sf3b6P59708 AC164092.1-201ENSMUST00000215635 2232 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Sf3b6P59708 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sf3b6P59708 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Sf3b6P59708 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC10.17□□□□□ -0.78
Sf3b6P59708 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC10.17□□□□□ -0.78
Sf3b6P59708 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC10.17□□□□□ -0.78
Sf3b6P59708 Gm25214-201ENSMUST00000104573 129 ntBASIC10.17□□□□□ -0.78
Sf3b6P59708 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Sf3b6P59708 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Sf3b6P59708 Gm11531-201ENSMUST00000117614 555 ntBASIC10.17□□□□□ -0.78
Sf3b6P59708 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC10.17□□□□□ -0.78
Sf3b6P59708 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC10.17□□□□□ -0.78
Sf3b6P59708 Gm13350-201ENSMUST00000120519 479 ntBASIC10.17□□□□□ -0.78
Sf3b6P59708 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC10.17□□□□□ -0.78
Sf3b6P59708 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Sf3b6P59708 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Sf3b6P59708 Gm20482-202ENSMUST00000174729 825 ntBASIC10.17□□□□□ -0.78
Sf3b6P59708 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Sf3b6P59708 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Sf3b6P59708 Gm7118-201ENSMUST00000200167 1003 ntBASIC10.17□□□□□ -0.78
Sf3b6P59708 CT571245.2-201ENSMUST00000218421 305 ntBASIC10.17□□□□□ -0.78
Sf3b6P59708 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sf3b6P59708 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Sf3b6P59708 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sf3b6P59708 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC10.17□□□□□ -0.78
Sf3b6P59708 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sf3b6P59708 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Sf3b6P59708 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Sf3b6P59708 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sf3b6P59708 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sf3b6P59708 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sf3b6P59708 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Sf3b6P59708 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sf3b6P59708 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sf3b6P59708 Gm44663-201ENSMUST00000206898 3150 ntBASIC10.17□□□□□ -0.78
Sf3b6P59708 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Sf3b6P59708 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sf3b6P59708 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sf3b6P59708 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Sf3b6P59708 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sf3b6P59708 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sf3b6P59708 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC10.17□□□□□ -0.78
Sf3b6P59708 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sf3b6P59708 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sf3b6P59708 Gm1840-201ENSMUST00000051687 1432 ntBASIC10.16□□□□□ -0.78
Sf3b6P59708 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sf3b6P59708 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Sf3b6P59708 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Sf3b6P59708 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Sf3b6P59708 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sf3b6P59708 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sf3b6P59708 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC10.16□□□□□ -0.78
Sf3b6P59708 AC091458.1-201ENSMUST00000220902 1361 ntBASIC10.16□□□□□ -0.78
Sf3b6P59708 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sf3b6P59708 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC10.16□□□□□ -0.78
Sf3b6P59708 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Sf3b6P59708 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Sf3b6P59708 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sf3b6P59708 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC10.16□□□□□ -0.78
Sf3b6P59708 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sf3b6P59708 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC10.16□□□□□ -0.78
Sf3b6P59708 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sf3b6P59708 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC10.16□□□□□ -0.78
Sf3b6P59708 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sf3b6P59708 Gm14071-201ENSMUST00000117817 509 ntBASIC10.16□□□□□ -0.78
Sf3b6P59708 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC10.16□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms