Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Gm28205-201ENSMUST00000189177 697 ntBASIC10.93□□□□□ -0.66
Cdkn2bP55271 Gm29032-201ENSMUST00000189797 697 ntBASIC10.93□□□□□ -0.66
Cdkn2bP55271 Gm28695-201ENSMUST00000190300 697 ntBASIC10.93□□□□□ -0.66
Cdkn2bP55271 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC10.93□□□□□ -0.66
Cdkn2bP55271 Gm37448-201ENSMUST00000192795 697 ntBASIC10.93□□□□□ -0.66
Cdkn2bP55271 Gm37666-201ENSMUST00000194110 866 ntBASIC10.93□□□□□ -0.66
Cdkn2bP55271 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC10.93□□□□□ -0.66
Cdkn2bP55271 Gm9353-201ENSMUST00000200472 604 ntBASIC10.93□□□□□ -0.66
Cdkn2bP55271 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC10.93□□□□□ -0.66
Cdkn2bP55271 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC10.93□□□□□ -0.66
Cdkn2bP55271 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cdkn2bP55271 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC10.93□□□□□ -0.66
Cdkn2bP55271 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC10.93□□□□□ -0.66
Cdkn2bP55271 Gm6867-201ENSMUST00000219165 425 ntBASIC10.93□□□□□ -0.66
Cdkn2bP55271 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cdkn2bP55271 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cdkn2bP55271 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdkn2bP55271 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdkn2bP55271 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Cdkn2bP55271 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdkn2bP55271 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Cdkn2bP55271 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Cdkn2bP55271 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Cdkn2bP55271 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdkn2bP55271 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC10.93□□□□□ -0.66
Cdkn2bP55271 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Cdkn2bP55271 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Cdkn2bP55271 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Cdkn2bP55271 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC10.93□□□□□ -0.66
Cdkn2bP55271 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdkn2bP55271 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdkn2bP55271 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdkn2bP55271 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdkn2bP55271 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdkn2bP55271 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdkn2bP55271 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdkn2bP55271 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cdkn2bP55271 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cdkn2bP55271 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cdkn2bP55271 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdkn2bP55271 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC10.92□□□□□ -0.66
Cdkn2bP55271 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Cdkn2bP55271 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdkn2bP55271 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdkn2bP55271 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cdkn2bP55271 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Cdkn2bP55271 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdkn2bP55271 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Cdkn2bP55271 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdkn2bP55271 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdkn2bP55271 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cdkn2bP55271 Gm43482-201ENSMUST00000202797 1861 ntBASIC10.92□□□□□ -0.66
Cdkn2bP55271 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdkn2bP55271 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Cdkn2bP55271 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdkn2bP55271 Gm24255-201ENSMUST00000104481 128 ntBASIC10.92□□□□□ -0.66
Cdkn2bP55271 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Cdkn2bP55271 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC10.92□□□□□ -0.66
Cdkn2bP55271 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cdkn2bP55271 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC10.92□□□□□ -0.66
Cdkn2bP55271 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cdkn2bP55271 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cdkn2bP55271 Gm8459-201ENSMUST00000162504 760 ntBASIC10.92□□□□□ -0.66
Cdkn2bP55271 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Cdkn2bP55271 Mir7677-201ENSMUST00000184226 67 ntBASIC10.92□□□□□ -0.66
Cdkn2bP55271 Gm3332-201ENSMUST00000189337 928 ntBASIC10.92□□□□□ -0.66
Cdkn2bP55271 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cdkn2bP55271 Gm18038-201ENSMUST00000197900 485 ntBASIC10.92□□□□□ -0.66
Cdkn2bP55271 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC10.92□□□□□ -0.66
Cdkn2bP55271 Gm8913-201ENSMUST00000209491 641 ntBASIC10.92□□□□□ -0.66
Cdkn2bP55271 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC10.92□□□□□ -0.66
Cdkn2bP55271 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC10.92□□□□□ -0.66
Cdkn2bP55271 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC10.92□□□□□ -0.66
Cdkn2bP55271 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC10.92□□□□□ -0.66
Cdkn2bP55271 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdkn2bP55271 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdkn2bP55271 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC10.92□□□□□ -0.66
Cdkn2bP55271 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdkn2bP55271 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cdkn2bP55271 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdkn2bP55271 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdkn2bP55271 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdkn2bP55271 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdkn2bP55271 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdkn2bP55271 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdkn2bP55271 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdkn2bP55271 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC10.92□□□□□ -0.66
Cdkn2bP55271 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdkn2bP55271 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cdkn2bP55271 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdkn2bP55271 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC10.91□□□□□ -0.66
Cdkn2bP55271 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC10.91□□□□□ -0.66
Cdkn2bP55271 AC174797.1-201ENSMUST00000224339 1649 ntBASIC10.91□□□□□ -0.66
Cdkn2bP55271 AC149588.2-201ENSMUST00000228182 1859 ntBASIC10.91□□□□□ -0.66
Cdkn2bP55271 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cdkn2bP55271 Gm10548-201ENSMUST00000097631 2629 ntBASIC10.91□□□□□ -0.66
Cdkn2bP55271 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC10.91□□□□□ -0.66
Cdkn2bP55271 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cdkn2bP55271 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cdkn2bP55271 AC155245.1-201ENSMUST00000222266 1804 ntBASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms