Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Fdft1P53798 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Fdft1P53798 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Fdft1P53798 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Fdft1P53798 Gm44826-201ENSMUST00000207648 2332 ntBASIC11.44□□□□□ -0.58
Fdft1P53798 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC11.44□□□□□ -0.58
Fdft1P53798 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Fdft1P53798 Gm45199-201ENSMUST00000207640 1507 ntBASIC11.44□□□□□ -0.58
Fdft1P53798 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Fdft1P53798 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Fdft1P53798 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Fdft1P53798 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Fdft1P53798 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Fdft1P53798 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Fdft1P53798 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Fdft1P53798 Gm44755-201ENSMUST00000207830 2102 ntBASIC11.44□□□□□ -0.58
Fdft1P53798 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Fdft1P53798 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Fdft1P53798 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Fdft1P53798 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Fdft1P53798 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Fdft1P53798 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Fdft1P53798 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Fdft1P53798 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Fdft1P53798 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Fdft1P53798 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC11.43□□□□□ -0.58
Fdft1P53798 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Fdft1P53798 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Fdft1P53798 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Fdft1P53798 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Fdft1P53798 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Fdft1P53798 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Fdft1P53798 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Fdft1P53798 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Fdft1P53798 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
Fdft1P53798 Gm14017-201ENSMUST00000121934 386 ntBASIC11.43□□□□□ -0.58
Fdft1P53798 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC11.43□□□□□ -0.58
Fdft1P53798 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Fdft1P53798 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC11.43□□□□□ -0.58
Fdft1P53798 Gm25881-201ENSMUST00000157783 103 ntBASIC11.43□□□□□ -0.58
Fdft1P53798 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC11.43□□□□□ -0.58
Fdft1P53798 Gm2260-201ENSMUST00000184965 657 ntBASIC11.43□□□□□ -0.58
Fdft1P53798 Mir8093-201ENSMUST00000185043 137 ntBASIC11.43□□□□□ -0.58
Fdft1P53798 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC11.43□□□□□ -0.58
Fdft1P53798 Gstp-ps-201ENSMUST00000195526 631 ntBASIC11.43□□□□□ -0.58
Fdft1P53798 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Fdft1P53798 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC11.43□□□□□ -0.58
Fdft1P53798 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Fdft1P53798 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Fdft1P53798 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Fdft1P53798 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Fdft1P53798 Gm5537-201ENSMUST00000091117 1252 ntBASIC11.43□□□□□ -0.58
Fdft1P53798 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Fdft1P53798 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC11.43□□□□□ -0.58
Fdft1P53798 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Fdft1P53798 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Fdft1P53798 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Fdft1P53798 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Fdft1P53798 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Fdft1P53798 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Fdft1P53798 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Fdft1P53798 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Fdft1P53798 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Fdft1P53798 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Fdft1P53798 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Fdft1P53798 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Fdft1P53798 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Fdft1P53798 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Fdft1P53798 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Fdft1P53798 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.42□□□□□ -0.58
Fdft1P53798 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Fdft1P53798 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Fdft1P53798 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Fdft1P53798 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Fdft1P53798 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Fdft1P53798 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Fdft1P53798 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Fdft1P53798 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Fdft1P53798 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Fdft1P53798 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Fdft1P53798 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Fdft1P53798 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Fdft1P53798 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Fdft1P53798 Gm12196-201ENSMUST00000120954 262 ntBASIC11.42□□□□□ -0.58
Fdft1P53798 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC11.42□□□□□ -0.58
Fdft1P53798 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
Fdft1P53798 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Fdft1P53798 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC11.42□□□□□ -0.58
Fdft1P53798 Gm9176-201ENSMUST00000219955 1120 ntBASIC11.42□□□□□ -0.58
Fdft1P53798 Gm18065-201ENSMUST00000221395 526 ntBASIC11.42□□□□□ -0.58
Fdft1P53798 AC134869.4-202ENSMUST00000224350 837 ntBASIC11.42□□□□□ -0.58
Fdft1P53798 CT030182.1-201ENSMUST00000225935 533 ntBASIC11.42□□□□□ -0.58
Fdft1P53798 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Fdft1P53798 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Fdft1P53798 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Fdft1P53798 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
Fdft1P53798 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Fdft1P53798 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Fdft1P53798 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC11.42□□□□□ -0.58
Fdft1P53798 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms