Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm34023-201ENSMUST00000195539 217 ntBASIC12.09□□□□□ -0.47
Shmt1P50431 Gm42657-201ENSMUST00000201746 211 ntBASIC12.09□□□□□ -0.47
Shmt1P50431 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC12.09□□□□□ -0.47
Shmt1P50431 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Shmt1P50431 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC12.09□□□□□ -0.47
Shmt1P50431 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Shmt1P50431 AC132901.1-201ENSMUST00000224345 508 ntBASIC12.09□□□□□ -0.47
Shmt1P50431 CT025602.2-201ENSMUST00000226553 772 ntBASIC12.09□□□□□ -0.47
Shmt1P50431 Gm5468-202ENSMUST00000227851 682 ntBASIC12.09□□□□□ -0.47
Shmt1P50431 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Shmt1P50431 Gm45776-201ENSMUST00000212366 1522 ntBASIC12.09□□□□□ -0.47
Shmt1P50431 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Shmt1P50431 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC12.09□□□□□ -0.47
Shmt1P50431 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC12.09□□□□□ -0.47
Shmt1P50431 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Shmt1P50431 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
Shmt1P50431 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Shmt1P50431 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Shmt1P50431 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC12.09□□□□□ -0.47
Shmt1P50431 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Shmt1P50431 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC12.09□□□□□ -0.47
Shmt1P50431 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Shmt1P50431 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Shmt1P50431 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Shmt1P50431 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.47
Shmt1P50431 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC12.08□□□□□ -0.47
Shmt1P50431 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Shmt1P50431 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC12.08□□□□□ -0.48
Shmt1P50431 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC12.08□□□□□ -0.48
Shmt1P50431 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Shmt1P50431 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Shmt1P50431 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Shmt1P50431 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC12.08□□□□□ -0.48
Shmt1P50431 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Shmt1P50431 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Shmt1P50431 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Shmt1P50431 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Shmt1P50431 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Shmt1P50431 Gm12899-201ENSMUST00000120565 551 ntBASIC12.08□□□□□ -0.48
Shmt1P50431 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Shmt1P50431 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC12.08□□□□□ -0.48
Shmt1P50431 Gm22138-201ENSMUST00000158748 128 ntBASIC12.08□□□□□ -0.48
Shmt1P50431 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Shmt1P50431 Gm5342-201ENSMUST00000181982 1003 ntBASIC12.08□□□□□ -0.48
Shmt1P50431 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC12.08□□□□□ -0.48
Shmt1P50431 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Shmt1P50431 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC12.08□□□□□ -0.48
Shmt1P50431 Gm45856-201ENSMUST00000212752 416 ntBASIC12.08□□□□□ -0.48
Shmt1P50431 CT030170.2-201ENSMUST00000223267 126 ntBASIC12.08□□□□□ -0.48
Shmt1P50431 AC154257.1-202ENSMUST00000224729 843 ntBASIC12.08□□□□□ -0.48
Shmt1P50431 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Shmt1P50431 Gm5171-201ENSMUST00000214944 1415 ntBASIC12.08□□□□□ -0.48
Shmt1P50431 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Shmt1P50431 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Shmt1P50431 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Shmt1P50431 Gm8899-201ENSMUST00000214635 1332 ntBASIC12.08□□□□□ -0.48
Shmt1P50431 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Shmt1P50431 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Shmt1P50431 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Shmt1P50431 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Shmt1P50431 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Shmt1P50431 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Shmt1P50431 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Shmt1P50431 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shmt1P50431 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC12.07□□□□□ -0.48
Shmt1P50431 Gm17213-201ENSMUST00000165161 1360 ntBASIC12.07□□□□□ -0.48
Shmt1P50431 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shmt1P50431 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shmt1P50431 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC12.07□□□□□ -0.48
Shmt1P50431 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Shmt1P50431 Gm15528-201ENSMUST00000117821 864 ntBASIC12.07□□□□□ -0.48
Shmt1P50431 Gm14740-201ENSMUST00000118538 1150 ntBASIC12.07□□□□□ -0.48
Shmt1P50431 Gm11451-201ENSMUST00000118946 630 ntBASIC12.07□□□□□ -0.48
Shmt1P50431 n-R5s84-201ENSMUST00000122591 109 ntBASIC12.07□□□□□ -0.48
Shmt1P50431 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC12.07□□□□□ -0.48
Shmt1P50431 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Shmt1P50431 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC12.07□□□□□ -0.48
Shmt1P50431 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Shmt1P50431 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.07□□□□□ -0.48
Shmt1P50431 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Shmt1P50431 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC12.07□□□□□ -0.48
Shmt1P50431 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC12.07□□□□□ -0.48
Shmt1P50431 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Shmt1P50431 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC12.07□□□□□ -0.48
Shmt1P50431 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC12.07□□□□□ -0.48
Shmt1P50431 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shmt1P50431 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shmt1P50431 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shmt1P50431 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shmt1P50431 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shmt1P50431 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shmt1P50431 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shmt1P50431 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC12.07□□□□□ -0.48
Shmt1P50431 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shmt1P50431 Gm6655-201ENSMUST00000201932 1309 ntBASIC12.07□□□□□ -0.48
Shmt1P50431 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shmt1P50431 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Shmt1P50431 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Shmt1P50431 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Shmt1P50431 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms