Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SftpbP50405 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
SftpbP50405 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SftpbP50405 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
SftpbP50405 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
SftpbP50405 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC11.67□□□□□ -0.54
SftpbP50405 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SftpbP50405 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SftpbP50405 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SftpbP50405 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
SftpbP50405 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
SftpbP50405 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SftpbP50405 Gm15207-201ENSMUST00000119259 442 ntBASIC11.67□□□□□ -0.54
SftpbP50405 Gm12715-201ENSMUST00000121430 1128 ntBASIC11.67□□□□□ -0.54
SftpbP50405 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC11.67□□□□□ -0.54
SftpbP50405 Ighv1-62-201ENSMUST00000193406 350 ntBASIC11.67□□□□□ -0.54
SftpbP50405 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC11.67□□□□□ -0.54
SftpbP50405 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SftpbP50405 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SftpbP50405 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
SftpbP50405 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
SftpbP50405 Gm26448-201ENSMUST00000082446 203 ntBASIC11.67□□□□□ -0.54
SftpbP50405 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SftpbP50405 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC11.67□□□□□ -0.54
SftpbP50405 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SftpbP50405 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
SftpbP50405 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC11.67□□□□□ -0.54
SftpbP50405 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
SftpbP50405 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
SftpbP50405 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SftpbP50405 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SftpbP50405 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SftpbP50405 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
SftpbP50405 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SftpbP50405 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC11.67□□□□□ -0.54
SftpbP50405 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC11.67□□□□□ -0.54
SftpbP50405 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SftpbP50405 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SftpbP50405 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
SftpbP50405 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC11.66□□□□□ -0.54
SftpbP50405 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SftpbP50405 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
SftpbP50405 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC11.66□□□□□ -0.54
SftpbP50405 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
SftpbP50405 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SftpbP50405 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
SftpbP50405 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
SftpbP50405 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SftpbP50405 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SftpbP50405 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
SftpbP50405 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SftpbP50405 Gm9466-201ENSMUST00000218144 2246 ntBASIC11.66□□□□□ -0.54
SftpbP50405 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
SftpbP50405 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
SftpbP50405 AC211878.3-201ENSMUST00000222629 2018 ntBASIC11.66□□□□□ -0.54
SftpbP50405 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
SftpbP50405 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
SftpbP50405 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
SftpbP50405 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SftpbP50405 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
SftpbP50405 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
SftpbP50405 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SftpbP50405 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC11.66□□□□□ -0.54
SftpbP50405 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC11.66□□□□□ -0.54
SftpbP50405 Gm43630-201ENSMUST00000201550 776 ntBASIC11.66□□□□□ -0.54
SftpbP50405 Gm44262-201ENSMUST00000204969 372 ntBASIC11.66□□□□□ -0.54
SftpbP50405 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC11.66□□□□□ -0.54
SftpbP50405 Gm21027-201ENSMUST00000219300 1236 ntBASIC11.66□□□□□ -0.54
SftpbP50405 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SftpbP50405 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SftpbP50405 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SftpbP50405 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC11.66□□□□□ -0.54
SftpbP50405 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
SftpbP50405 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SftpbP50405 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC11.66□□□□□ -0.54
SftpbP50405 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SftpbP50405 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
SftpbP50405 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
SftpbP50405 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
SftpbP50405 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SftpbP50405 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC11.66□□□□□ -0.54
SftpbP50405 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC11.66□□□□□ -0.54
SftpbP50405 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SftpbP50405 Gm43522-201ENSMUST00000196697 1922 ntBASIC11.66□□□□□ -0.54
SftpbP50405 Gm45206-201ENSMUST00000206885 2285 ntBASIC11.66□□□□□ -0.54
SftpbP50405 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SftpbP50405 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SftpbP50405 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SftpbP50405 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SftpbP50405 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SftpbP50405 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
SftpbP50405 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
SftpbP50405 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
SftpbP50405 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.54
SftpbP50405 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
SftpbP50405 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
SftpbP50405 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
SftpbP50405 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
SftpbP50405 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
SftpbP50405 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms