Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-6P43688 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-6P43688 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-6P43688 Gm6211-201ENSMUST00000147973 4275 ntBASIC10.84□□□□□ -0.67
Nkx2-6P43688 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-6P43688 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-6P43688 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Nkx2-6P43688 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-6P43688 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-6P43688 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC10.84□□□□□ -0.67
Nkx2-6P43688 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-6P43688 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-6P43688 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-6P43688 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-6P43688 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-6P43688 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-6P43688 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-6P43688 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC10.84□□□□□ -0.67
Nkx2-6P43688 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Nkx2-6P43688 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-6P43688 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-6P43688 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-6P43688 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-6P43688 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-6P43688 Gm10169-201ENSMUST00000121822 348 ntBASIC10.84□□□□□ -0.67
Nkx2-6P43688 Gm11960-201ENSMUST00000122068 925 ntBASIC10.84□□□□□ -0.67
Nkx2-6P43688 n-R5s84-201ENSMUST00000122591 109 ntBASIC10.84□□□□□ -0.67
Nkx2-6P43688 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC10.84□□□□□ -0.67
Nkx2-6P43688 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Nkx2-6P43688 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC10.84□□□□□ -0.67
Nkx2-6P43688 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC10.84□□□□□ -0.67
Nkx2-6P43688 Gm23218-201ENSMUST00000158124 276 ntBASIC10.84□□□□□ -0.67
Nkx2-6P43688 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC10.84□□□□□ -0.67
Nkx2-6P43688 Mir6407-201ENSMUST00000184510 101 ntBASIC10.84□□□□□ -0.67
Nkx2-6P43688 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC10.84□□□□□ -0.67
Nkx2-6P43688 Gm29410-201ENSMUST00000188383 694 ntBASIC10.84□□□□□ -0.67
Nkx2-6P43688 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC10.84□□□□□ -0.67
Nkx2-6P43688 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC10.84□□□□□ -0.67
Nkx2-6P43688 CT030170.2-201ENSMUST00000223267 126 ntBASIC10.84□□□□□ -0.67
Nkx2-6P43688 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Nkx2-6P43688 Gm17213-201ENSMUST00000165161 1360 ntBASIC10.84□□□□□ -0.67
Nkx2-6P43688 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Nkx2-6P43688 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-6P43688 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-6P43688 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-6P43688 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-6P43688 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-6P43688 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-6P43688 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-6P43688 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-6P43688 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-6P43688 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-6P43688 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-6P43688 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-6P43688 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-6P43688 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Nkx2-6P43688 Gm7278-201ENSMUST00000119836 1401 ntBASIC10.84□□□□□ -0.67
Nkx2-6P43688 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Nkx2-6P43688 Gm18642-201ENSMUST00000206642 1400 ntBASIC10.84□□□□□ -0.67
Nkx2-6P43688 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-6P43688 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Nkx2-6P43688 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC10.83□□□□□ -0.67
Nkx2-6P43688 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkx2-6P43688 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkx2-6P43688 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC10.83□□□□□ -0.68
Nkx2-6P43688 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC10.83□□□□□ -0.68
Nkx2-6P43688 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkx2-6P43688 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Nkx2-6P43688 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC10.83□□□□□ -0.68
Nkx2-6P43688 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Nkx2-6P43688 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Nkx2-6P43688 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkx2-6P43688 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkx2-6P43688 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkx2-6P43688 Gm11500-201ENSMUST00000118237 601 ntBASIC10.83□□□□□ -0.68
Nkx2-6P43688 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC10.83□□□□□ -0.68
Nkx2-6P43688 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Nkx2-6P43688 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC10.83□□□□□ -0.68
Nkx2-6P43688 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC10.83□□□□□ -0.68
Nkx2-6P43688 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Nkx2-6P43688 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC10.83□□□□□ -0.68
Nkx2-6P43688 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC10.83□□□□□ -0.68
Nkx2-6P43688 Gm45758-201ENSMUST00000212448 1006 ntBASIC10.83□□□□□ -0.68
Nkx2-6P43688 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC10.83□□□□□ -0.68
Nkx2-6P43688 Ap3s1-202ENSMUST00000224622 978 ntBASIC10.83□□□□□ -0.68
Nkx2-6P43688 Lgi3-203ENSMUST00000226548 1001 ntBASIC10.83□□□□□ -0.68
Nkx2-6P43688 AC102368.1-201ENSMUST00000227161 892 ntBASIC10.83□□□□□ -0.68
Nkx2-6P43688 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkx2-6P43688 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Nkx2-6P43688 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkx2-6P43688 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Nkx2-6P43688 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Nkx2-6P43688 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkx2-6P43688 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkx2-6P43688 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkx2-6P43688 AC138329.2-201ENSMUST00000225579 1842 ntBASIC10.83□□□□□ -0.68
Nkx2-6P43688 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Nkx2-6P43688 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkx2-6P43688 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkx2-6P43688 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms